Pairwise Alignments

Query, 263 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 1e-26
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 21/253 (8%)

Query: 21  GLTFARHSHDECVIGVNLLGEEKVWLDRREFDAGPGSITLYNPGQIQGGGAAEGAPWHFV 80
           G  +  H HD  ++GV   G ++    R    + PG + L  PG I  G A     + + 
Sbjct: 24  GHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGLAPTEEGFTYS 83

Query: 81  SLY---ATADQLAADL-----GLAHLEFDRSLCFQPDLAQRLAAAIKGALSTDT-LVREL 131
           +LY   A  DQ    L     G +   F  +LC    LA+  A A +     D  +VR+ 
Sbjct: 84  TLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVHDQDLRIVRQT 143

Query: 132 NEEALVLLLGQVVN-----TSGVRLPGSANTGKPLINRAQELLAAQLHQPLTLDHLGVEL 186
             + L+  L + ++         RLP +A        RA++ L A L + + L+ L    
Sbjct: 144 AMDDLLACLTRHLHWRRRINPDPRLPLTAQ-------RARDFLHANLERDIGLEDLAQAC 196

Query: 187 GLSKFHLLRAFQKETGLTPREWAMQLRTRRAKGLLRNGVPASAAAHTLGFADQSHLNRHF 246
           G+ +F L RAF+   G+ P  + +QLR  RA+ LL  G   +  A  LGFADQSHL R F
Sbjct: 197 GIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQSHLGRWF 256

Query: 247 RAAYGITPGVYQR 259
           R AY +TP  Y+R
Sbjct: 257 RRAYQLTPADYRR 269