Pairwise Alignments

Query, 263 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  133 bits (335), Expect = 4e-36
 Identities = 97/272 (35%), Positives = 132/272 (48%), Gaps = 25/272 (9%)

Query: 6   HAW----LGNYEISSTACTGLTFARHSHDECVIGVNLLGEEKVWLDRREFDAGPGSITLY 61
           H W    LG+ E+         FA H H+  V  V   G ++ W    E  A  GS+ L 
Sbjct: 10  HLWQAPALGDVEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLI 69

Query: 62  NPGQIQGGGAAEGAPWHFVSLYATADQLAADLGLAHL------EFDRSLCFQPDLA---- 111
           NP ++  G  A  A W +   Y   +++   L    L       F  S+   P LA    
Sbjct: 70  NPDELHTGATAHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIHDPALALAFS 129

Query: 112 --QRLAAAIKGALSTDTLVRELNEEALVLLLGQVVNTSGVRLPGSANTGKPL-INRAQEL 168
              +L+ A   AL   T  R+    ALV   GQ    S    PG     +PL + RA+EL
Sbjct: 130 QLHQLSEASASALQQQTAWRQA-VLALVQRHGQCAEPSA---PGH----EPLAVARAREL 181

Query: 169 LAAQLHQPLTLDHLGVELGLSKFHLLRAFQKETGLTPREWAMQLRTRRAKGLLRNGVPAS 228
           L +QL  P +L+ L   + LS FH  R F++ TGL P  W  Q R  RA+ +L++G+ AS
Sbjct: 182 LESQLADPPSLEALAAAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAAS 241

Query: 229 AAAHTLGFADQSHLNRHFRAAYGITPGVYQRA 260
             A  LGFADQSHL+R F+ AYG+TPG Y++A
Sbjct: 242 QVAFDLGFADQSHLSRQFKQAYGVTPGAYRQA 273