Pairwise Alignments

Query, 234 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 233 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  280 bits (717), Expect = 1e-80
 Identities = 154/234 (65%), Positives = 175/234 (74%), Gaps = 1/234 (0%)

Query: 1   MLPSPRKPYVNAALAHRQRWRGRVGLMLVASLSVLAGMTDAIGFMASGDFVSFMSGNTTR 60
           MLP+   P  +A     Q  RGRVGL LVA+LSVLAGMTDAIG +A GDFVSFMSGNTTR
Sbjct: 1   MLPNAL-PARSARRLRLQVMRGRVGLGLVAALSVLAGMTDAIGLLALGDFVSFMSGNTTR 59

Query: 61  LAVAISEGDLGLTGRLLLLVATFVVGNALGVVVSRMSRRHALPLLLCIATLLCGAAWLPS 120
           LAVAISE DL L  RL   V  FV GNALGV+++   RR A P+LL +A LL  AA  P 
Sbjct: 60  LAVAISEADLALVLRLSGAVLGFVAGNALGVLLAHGLRRRAWPVLLVVAALLAFAAAWPL 119

Query: 121 GDTLPALLAAIIAMGMLNAAVEEVNGLPVGLTYVTGALSRFGRGLGRWLLGERRMGWRVQ 180
             T PALLAA +AMGM+NA VE+VNGLP+GLTYVTGALSRFGRGLGRWLLGERR GWRVQ
Sbjct: 120 PATFPALLAATLAMGMINAVVEQVNGLPIGLTYVTGALSRFGRGLGRWLLGERRNGWRVQ 179

Query: 181 LIPWAGMFVGAVIGALLEHQMGLKALLVSGVLAGLLGLVSLKIPRRWHLGYMPR 234
           L+PWAGM +GA +GA L+  +GL+AL  S  LA +L L+S  IPR W  GYMPR
Sbjct: 180 LVPWAGMLLGAALGAWLQQHLGLQALAGSCALACVLALISRFIPRSWQRGYMPR 233