Pairwise Alignments
Query, 540 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417
Subject, 636 a.a., putative of ABC superfamily informational factor: ATP-binding components from Pseudomonas putida KT2440
Score = 187 bits (474), Expect = 1e-51
Identities = 168/530 (31%), Positives = 258/530 (48%), Gaps = 56/530 (10%)
Query: 10 LVSLQHLSVQFANGETLLD--DLCLSIDHTPTGIVGRNGRGKSVLAKLIAGLLSPSSGT- 66
++ L +L++Q + LL+ ++ L H G++G NG GKS L L+ G LSP +G
Sbjct: 1 MIRLSNLTLQ-RGPQRLLEGAEMTLHAGHK-AGLIGANGAGKSSLFALLRGELSPDAGDC 58
Query: 67 -LSGPPGTIYVAQNVVVAPGETV-------ADLTGTAAILAALDRMARGAAQP---DDLE 115
L G ++ Q V V L A LAA ++ G A +LE
Sbjct: 59 QLPGDWRIAHMRQEVDTLDRLAVDYVLDGDVRLRKVQAELAAAEQAHDGTALARLHSELE 118
Query: 116 LIDDRWGLAERLRNALDAAGLSQLAFDTPADQLSGGQLARVAIIGALLAAPPLLVLDEPT 175
D A R R L G + D SGG R+ + AL+ LL+LDEPT
Sbjct: 119 SADGYTADA-RARKLLAGLGFTNEQMDRRVGDFSGGWRMRLNLAQALMCPSDLLLLDEPT 177
Query: 176 NHLDNDGRAWLLRALGDWRGGLVVVSHDRSLLNAMA-RIVELSPLGVSVYGGNYDAYRRQ 234
NHLD D WL L + G L+++SHDR L+A+ ++ + +++Y G Y A+ R
Sbjct: 178 NHLDLDAILWLEDWLKGYPGTLLLISHDRDFLDAVVDHVLHVEQRKLNLYKGGYTAFERT 237
Query: 235 RDAEQQAAIAALDHARLERSRERRRLQKDHDNLQRNAARSRKHAETANVDRFTKARWKGA 294
R AE+ A+ +++ E+++ Q+ H +++ AR + A A +A+ +
Sbjct: 238 R-AERL--------AQQQQAYEKQQAQRAH--MEKYIARFKAQATKAR-----QAQSRIK 281
Query: 295 ATQIVSSVRSAHWQHKHELDAQVRQAYERVEEETPTLLALPASAVPNGRQVLSLIDVQLP 354
A + + + +AH +D+ + ++ + LL+L + G + + L V+L
Sbjct: 282 ALERMEELSAAH------VDSPFDFVFRESQKISSPLLSLSEGRLGYGDKAI-LDKVKLQ 334
Query: 355 WLPSSGLTVHLAGPVRVAVRGPNGCGKSTLLKVLAGEWQAVAGEC--SVPLPCAYIDQH- 411
P + R+ + GPNG GKSTL+K LAGE + ++G L Y QH
Sbjct: 335 LTPGA----------RIGLLGPNGAGKSTLIKNLAGELEPLSGRLVRGENLAVGYFAQHQ 384
Query: 412 LALLDDRRSIVEHLNLLDTPLAEAELRTRLALLHLDASRVTQPTGQLSGGERLKAAMAIA 471
L LDD+ S + HL + E LR L +R +P SGGE+ + A+A+
Sbjct: 385 LDSLDDKASPLLHLQRIAPTEREQTLRDFLGGFDFHGARCDEPVVNFSGGEKARLALALI 444
Query: 472 LWGDKPAQLLLLDEPTNHLDLESVMAFEQALQGFNGAMLVVSHDAAFIQS 521
W ++P LLLLDEPTNHLDLE +A ALQ F GA++VVSHD ++S
Sbjct: 445 AW-ERP-NLLLLDEPTNHLDLEMRLALTMALQEFAGAVVVVSHDRHLLKS 492
Score = 83.6 bits (205), Expect = 2e-20
Identities = 85/262 (32%), Positives = 118/262 (45%), Gaps = 40/262 (15%)
Query: 40 GIVGRNGRGKSVLAKLIAGLLSPSSGTLSGPPGTI--YVAQNVVVAPGETVADLTGTAAI 97
G++G NG GKS L K +AG L P SG L Y AQ+ + L A+
Sbjct: 342 GLLGPNGAGKSTLIKNLAGELEPLSGRLVRGENLAVGYFAQH-------QLDSLDDKASP 394
Query: 98 LAALDRMARGAAQPDDLELIDDRWGLAERLRNALDAAGLSQLAFDTPADQLSGGQLARVA 157
L L R+A P + E + LR+ L D P SGG+ AR+A
Sbjct: 395 LLHLQRIA-----PTERE---------QTLRDFLGGFDFHGARCDEPVVNFSGGEKARLA 440
Query: 158 IIGALLAAPPLLVLDEPTNHLDNDGRAWLLRALGDWRGGLVVVSHDRSLLNAMARIVELS 217
+ P LL+LDEPTNHLD + R L AL ++ G +VVVSHDR LL + L
Sbjct: 441 LALIAWERPNLLLLDEPTNHLDLEMRLALTMALQEFAGAVVVVSHDRHLLKSTTDDFLLV 500
Query: 218 PLG-VSVYGGNYDAYR------RQRDAEQQAAIAALDHARLERSRE-----RRRL---QK 262
G V + G+ + Y RQR A A A D + R+ R++L +K
Sbjct: 501 ADGKVDTFDGDLEDYSRWLVEYRQRSAPASTAPANPDKTDKKAQRQAAAALRQQLAPHKK 560
Query: 263 DHDNLQRNAARSRKHAETANVD 284
D L+ ++ HA+ A ++
Sbjct: 561 AADKLETEL--NQVHAQLAEIE 580
Score = 81.6 bits (200), Expect = 8e-20
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 41/202 (20%)
Query: 356 LPSSGLTVHLAGPVRVAVRGPNGCGKSTLLKVLAGEWQAVAGECSVP--LPCAYIDQHLA 413
L + +T+H + + G NG GKS+L +L GE AG+C +P A++ Q +
Sbjct: 17 LEGAEMTLHAGH--KAGLIGANGAGKSSLFALLRGELSPDAGDCQLPGDWRIAHMRQEVD 74
Query: 414 LLDDRRSIVEH---------------------------------LNLLDTPLAEAELRTR 440
LD R V++ L D A+A R
Sbjct: 75 TLD--RLAVDYVLDGDVRLRKVQAELAAAEQAHDGTALARLHSELESADGYTADARARKL 132
Query: 441 LALLHLDASRVTQPTGQLSGGERLKAAMAIALWGDKPAQLLLLDEPTNHLDLESVMAFEQ 500
LA L ++ + G SGG R++ +A AL P+ LLLLDEPTNHLDL++++ E
Sbjct: 133 LAGLGFTNEQMDRRVGDFSGGWRMRLNLAQALMC--PSDLLLLDEPTNHLDLDAILWLED 190
Query: 501 ALQGFNGAMLVVSHDAAFIQSI 522
L+G+ G +L++SHD F+ ++
Sbjct: 191 WLKGYPGTLLLISHDRDFLDAV 212