Pairwise Alignments

Query, 345 a.a., DNA topoisomerase from Pseudomonas simiae WCS417

Subject, 340 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  478 bits (1231), Expect = e-140
 Identities = 225/334 (67%), Positives = 271/334 (81%)

Query: 1   MSDSALPRDLHYVDDTQPGIRRKTVRGRFQYFDPQGVRITDAEEIKRLNALAVPPAYTDV 60
           M D  LPR LHYVDD+QPG+ R+  R RF Y D  G R+ D+E + R+ AL +PPAYTDV
Sbjct: 1   MLDCPLPRTLHYVDDSQPGLTRRRWRDRFIYLDADGQRVRDSETLARIAALVIPPAYTDV 60

Query: 61  WICADPRGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQEFGNALPKLRKQLEAKIA 120
           WICADP+GHLQATGRDARGRKQYRYH +WRE+RD  KY R+  F  ALPKLR QLEA +A
Sbjct: 61  WICADPQGHLQATGRDARGRKQYRYHAQWRELRDQHKYGRMLAFAQALPKLRTQLEAHLA 120

Query: 121 EPGFTRKKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIQFQFRGK 180
            PG  R+KV+A VV LLD TLIR+GN +Y RDN+SYGLTTLR RHV VKGS I+FQFRGK
Sbjct: 121 RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNRSYGLTTLRNRHVQVKGSTIRFQFRGK 180

Query: 181 SGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEDGERHTVSSHDVNDYLHSLTGADFT 240
            GVEH +++ DRRLA ++KRC+ELPGQ LFQYLDEDG+RH+V S +VN +L  LTGADFT
Sbjct: 181 RGVEHNVTLNDRRLANLLKRCMELPGQALFQYLDEDGQRHSVGSSEVNQFLQQLTGADFT 240

Query: 241 AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIHPAVL 300
           AKDYRTWAG+++AL +L+ L W+PES+AKR V A+V+ VA +LGNTPAVCR+CYIHPAVL
Sbjct: 241 AKDYRTWAGSSLALNLLKPLAWEPESEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL 300

Query: 301 EHFSLGELSKLPKPRLRKGLKAEEVALAMFLEQL 334
           EH++LG L+ LPK R+RKGL  EEVAL +FL+ L
Sbjct: 301 EHYALGRLANLPKNRVRKGLDPEEVALLLFLQAL 334