Pairwise Alignments

Query, 335 a.a., integrase from Pseudomonas simiae WCS417

Subject, 328 a.a., putative cointegrate resolution protein T Tn4652 from Pseudomonas putida KT2440

 Score =  281 bits (720), Expect = 1e-80
 Identities = 156/320 (48%), Positives = 209/320 (65%)

Query: 1   MARGGINKAVVQTARLAILARGENPSIDAVRIEMGNTGSKTTIHRYLKELDESETRATIT 60
           MARGGINK VVQ AR A++ARGENPSIDA+RIE+GNTGSKTTIHRYLKEL+  +  A+  
Sbjct: 1   MARGGINKVVVQQARQALIARGENPSIDAIRIELGNTGSKTTIHRYLKELNGQQPVASEG 60

Query: 61  EAPIDDELGELVARLAQRLKEKAQEPIDLAMAQFEQQKAALLTQVEALEEAHSQLKQQFD 120
              + D L  LV +LA +L+++A   I+ A + F QQ+  L  Q+E   +A +   QQ  
Sbjct: 61  GVALSDVLSRLVGQLATQLQDEADLKIEQAESTFTQQREQLEAQLEIARQALAAAHQQHK 120

Query: 121 IQAAALAEESAALQTASTSLQTEQTRNAGLSQACSDYELRISDKDEQIRSLEEKHLHARD 180
           I AAALA E+  L +  ++LQ EQ R+A L+Q+  + ++R++DKDEQ++SLE+KH HARD
Sbjct: 121 IDAAALAAETEKLLSTQSTLQAEQLRSASLNQSLGELQVRLADKDEQVKSLEDKHRHARD 180

Query: 181 ALEHYRHAIKEQREQEQRRHEGQLQQVQAELRQAQQSAMVRQDEITQLHRDNERLLIEHR 240
           ALEHYR+A +EQREQEQRRHE QLQQ+Q ELRQ QQ  +V+QDE+T+LHRDNERLL EHR
Sbjct: 181 ALEHYRNASREQREQEQRRHEAQLQQMQVELRQLQQGMIVKQDELTRLHRDNERLLGEHR 240

Query: 241 VASKALTALQEQSRKDQAQLLKLNEQVGLIDSERTLLQERLRVAVLESQSRQAALAEHQH 300
            A+    A  E   +  AQ+  L   +         ++ +L V     ++R+   AE   
Sbjct: 241 QAASECRAQDELLEQRDAQIQGLRTILAQAQGASEEMRRQLDVQAQSLEARRDVCAEQAR 300

Query: 301 ANKTLELDLIKAQASLEALR 320
             + LE  L     +L   R
Sbjct: 301 QLQWLEEQLKARDEALAQCR 320