Pairwise Alignments

Query, 335 a.a., integrase from Pseudomonas simiae WCS417

Subject, 332 a.a., putative cointegrate resolution protein T Tn4652 from Pseudomonas putida KT2440

 Score =  262 bits (669), Expect = 1e-74
 Identities = 155/322 (48%), Positives = 199/322 (61%), Gaps = 4/322 (1%)

Query: 1   MARGGINKAVVQTARLAILARGENPSIDAVRIEMGNTGSKTTIHRYLKELDESETRATIT 60
           MARGGINKA+VQ AR AILARGENPSIDAVR+E+GNTGSKTTIHRYLKEL+++E      
Sbjct: 1   MARGGINKALVQKARQAILARGENPSIDAVRVELGNTGSKTTIHRYLKELEDAERGRNTA 60

Query: 61  EAPIDDELGELVARLAQRLKEKAQEPIDLAMAQFEQQKAALLTQVEALEEAHSQLKQQFD 120
             P+ ++L  LV +LA +L+E AQ  +     Q ++++     Q    E    QL+ Q  
Sbjct: 61  AIPLSEQLANLVGQLADQLEEDAQATVAQEREQLQRERLDYQNQARLAESRIQQLESQSS 120

Query: 121 IQAAALAEESAALQTASTSLQTEQTRNAGLSQACSDYELRISDKDEQIRSLEEKHLHARD 180
                L     ALQ      Q  +  NA L+QA  D E+R+ D+D QIRSLEEKH HARD
Sbjct: 121 GLTEQLQAVQQALQQEQQQRQQTEVENARLAQANGDQEVRLQDRDSQIRSLEEKHQHARD 180

Query: 181 ALEHYRHAIKEQREQEQRRHEGQLQQVQAELRQAQQSAMVRQDEITQLHRDNERLLIEHR 240
           ALEHYR A KEQREQEQRRHE Q+QQ+Q ELRQ QQ+ +++QDE+TQL+RDN RLL E R
Sbjct: 181 ALEHYRQASKEQREQEQRRHESQVQQLQLELRQLQQTLIIKQDELTQLNRDNARLLTEAR 240

Query: 241 VASKALTALQEQSRKDQAQLLKLNEQVGLIDSERT--LLQERLRVAVLESQSRQAALAEH 298
              K   A Q+Q    + Q ++  + V L  SER+   L++R R    E      A A  
Sbjct: 241 QLQKEQHA-QQQLLAQKNQAMEALQSV-LAGSERSNEALEQRCRTLQEEVSRLGEASATL 298

Query: 299 QHANKTLELDLIKAQASLEALR 320
               + L+  L++A   L+ LR
Sbjct: 299 AQQAQGLQERLVEANTQLKLLR 320