Pairwise Alignments

Query, 308 a.a., recombinase from Pseudomonas simiae WCS417

Subject, 337 a.a., tyrosine-type recombinase/integrase from Rhodanobacter sp000427505 FW510-R12

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 82/324 (25%), Positives = 133/324 (41%), Gaps = 51/324 (15%)

Query: 12  TRDNTRRSYRAAIEH----FEVSWGGFLPATSASVA---RYLVAHA-------------- 50
           T  NT RSY +A+ +    + + +G  L  T  SVA   +++V H               
Sbjct: 17  TPANTARSYASALRYWAAWYALRYGQVLGDTPVSVAVASQFIVDHLERKAAHGLQHELPA 76

Query: 51  ---------------GVLAVNTLKLRLSALAQWHTSQGFPDPTKAPVVRKVLKGIRAVHP 95
                          G LA  T+  RL+ LA+WH    +  P     ++ ++   R    
Sbjct: 77  ALDARLVALGAKAKLGALAYATVAHRLAVLAKWHRLHDWEPPGDDHRIKTLMAKARR--- 133

Query: 96  AQEKQAEPLQLKHLEQVVASLESEAKAAAHDLPRLLRAKRDTALILLGF-WRGFRSDELC 154
           AQ K+   ++ K      A +    +A        +R  RD AL+LL +   G R  E+ 
Sbjct: 134 AQAKRGVTVRKK-----TALVAEPLQAMLATCTDGVRGLRDRALLLLAWSGGGRRRSEVV 188

Query: 155 RLEIEHVHATPGAGISVYLPRSKSDRDNLGKTYHTPALLRLCPVQAYNEWLSASALVRGP 214
            ++I+ +        +  L  +K++    G     P  LR   V A   W+ A  L  G 
Sbjct: 189 GIQIDDIRRLGPTTWTYALGHTKTNAT--GGRREKP--LRGEVVLALEAWIEAVQLTEGA 244

Query: 215 VFRGIDRWGNLGEEGLHPNSVIPLLRQALERAGIPAEQYTSHSLRRGFATWAHRSGWDLK 274
           +FR + R G  G   L P+ V  ++++    A +P + + +HSLR GF T A R G  L 
Sbjct: 245 LFRRVYRNGRAGA-ALTPDQVARIVQRRATLAELPGD-WAAHSLRSGFVTEAGRQGVPLG 302

Query: 275 SLMSYVGWSDMKSAMRYVEATPFL 298
            +M+      + + M Y +A   L
Sbjct: 303 EVMAMTEHRSVGTVMGYFQAGALL 326