Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 298 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 14/285 (4%)

Query: 15  AVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQLLQLG 74
           A+ +IWG T++  R       PLL A +RF  A   + GFL    +P   P+  Q    G
Sbjct: 17  ALYVIWGSTYLVIRIGVEYWPPLLLAGIRFCTAGALMYGFLRWRGVPA--PTWPQWKAAG 74

Query: 75  MLGFFGIFFYNLCFFYGLQ-SINASRASLIVALNPAVIGLASRWLFKERLGASNVAGILL 133
           M+G   +   N          +++  A+L VA  P +  L   + +  R      AG++L
Sbjct: 75  MIGLLLLTVGNGGVSVAEHMGVSSGVAALAVATVP-LFTLLCGYFWGARNTRLEWAGVIL 133

Query: 134 CLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQTVTWS 193
            + G A++ +       +   SS  G +L+      W   S++SR L    G + +    
Sbjct: 134 GIIGIAMLNMG------STLQSSPMGAVLLLVAAASWAFGSVWSRQLPLPQGAMASAAEM 187

Query: 194 ILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYIGYYDGIRRIGATR 253
           ++ G  +L ++ L   R  L+A+  L+    L+LAYL V GS +A+  Y   ++ +    
Sbjct: 188 LVAGVALLMVSALSGER--LQAVPPLEG--WLALAYLTVFGSIIAFNAYMYLLKHVRPAA 243

Query: 254 SGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNKP 298
           +  +  +NP  AV+ G + + E + L   +   VI+  + L + P
Sbjct: 244 ATSYAYVNPAVAVLLGIVFVGETIGLEEALAMLVIISAVLLISLP 288