Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 13/298 (4%)

Query: 13  LAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQLLQ 72
           L  +  IWG +F+  R ++  +  +  A  R ++A+  LL  L + R+        + + 
Sbjct: 9   LLGLAAIWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMRVSWDFQGKFRTVL 68

Query: 73  LGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVAGIL 132
           L  LG          +    Q++ A  +++  A  P +  L     F ERL  S +AG+ 
Sbjct: 69  L--LGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSKIAGVC 126

Query: 133 LCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQTVTW 192
           L L G  V+  +       E  +     LL   C   +G     +R      G L +   
Sbjct: 127 LGLFGVGVLTRAGPVAFDLELLTGALACLLATTC---YGFAGFLARRWLDQRGGLDSRLS 183

Query: 193 SILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGL-----SLAYLGVLGSALAYIGYYDGIR 247
           +  LG+ ML  T  ++  F   A+ +   + G      SL  LG++ +A AYI Y+  + 
Sbjct: 184 A--LGS-MLGATLFLLPFFAYSAISQPPASWGGWQVWGSLLGLGLVCTAFAYILYFRLLT 240

Query: 248 RIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNKPLARARAM 305
            IG  +S     + P   V+ GALLL EPLS+  + GG +I   ++L  +P  R RA+
Sbjct: 241 SIGPVKSMTVTFMIPPFGVLWGALLLGEPLSMAHVYGGVLIGGALWLVLRPKNRERAV 298