Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 298 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 17/295 (5%)

Query: 18  MIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLAR---PSPRQLLQLG 74
           +IW G  V  +  +GT+ P   +  R+ LA+L    F  LA  P+ R       QL ++ 
Sbjct: 12  VIWSGNTVVSKMAAGTIAPAEISFYRWLLAALL---FTPLALRPVLRNWRAIRPQLGRIA 68

Query: 75  MLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVAGILLC 134
           +LG  G+  Y    +Y      A+   +I +L P ++   S  L  +RL A  VAG L+ 
Sbjct: 69  VLGLLGMVVYQSLAYYAAYLTTATHMGIIGSLTPMMVLALSIVLLGQRLTAGAVAGSLVS 128

Query: 135 LTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIY-SLFSRGLNQSLGPLQTVTWS 193
           + G  VV+ S +   L ++ ++  GD L+   ++ + IY  L  R   + +  LQ +   
Sbjct: 129 IMGVLVVVSSGDLGTLLKSGAN-MGDGLMLLAMLAYAIYVILLKRWGMKGVPALQLLYLQ 187

Query: 194 ILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYIGYYDGIRRIGATR 253
           I+   + L    L+  R  L A      A    + + G+  S LA + +   +  IG +R
Sbjct: 188 IVFAVIALLPLYLLTPRMGLSA------ANLPLIGFAGLGASMLAPLVWMHTVAHIGPSR 241

Query: 254 SGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLC---NKPLARARAM 305
           + +F  L PL   +  A+++ E L+    IGG + + G+ L      PL R+RA+
Sbjct: 242 ASMFFNLIPLFTALIAAVVIGESLAAYHAIGGVLTVAGVLLAELWKAPLRRSRAV 296