Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 290 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 84/295 (28%), Positives = 138/295 (46%), Gaps = 19/295 (6%)

Query: 18  MIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQLLQLGMLG 77
           ++WG    A + L+ + + L  ASLR  +A LAL   +   R  +     RQL  +    
Sbjct: 6   VLWGVNVSAVKALTTSFESLPLASLRMVVACLALSAIVLWRRGGVPALGARQLAAMTGCA 65

Query: 78  FFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVAGILLCLTG 137
           F  ++   + F  GL    A+  +LI+AL+P V  L +  +F+ER     + G+ L   G
Sbjct: 66  FLMVYANQILFAQGLLRSTATNGALIMALSPLVSALMAALVFRERFTPRRMLGVALGFAG 125

Query: 138 AAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQTVTWSI-LL 196
            A V++S     L+ A     GDL++   VV + +  +  + L + + PL +++W I ++
Sbjct: 126 VAAVVLSHPGAGLSRAGI---GDLMLALAVVSFAVGGVGVQRLARQIDPL-SISWVIYMI 181

Query: 197 GTLMLTLTTLIMGRFTLEAMGRLQTAQ-------GLSLAYLGVLGSALAYIGYYDGIRRI 249
           GT ML L TL+          RL TA+          + + G+  +A   + +   I  I
Sbjct: 182 GTAMLVLHTLL-------GPSRLGTAELFPGAWPWALVLFSGIAATAAGNLIWNRAISVI 234

Query: 250 GATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNKPLARARA 304
           G  R+ VF+   P+  V   ALLL E L+   L G   ++ G +L  +P A   A
Sbjct: 235 GVARTAVFLYWVPVFGVAFAALLLGEVLTWWHLFGFVAVMSGTWLGTRPAATTTA 289