Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 14/293 (4%)

Query: 10  YMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQ 69
           Y+ L   T+ WGG  VAG+   G + P+    LR+ LA +A++  + + ++    P  +Q
Sbjct: 13  YLALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLA-VAIIFAISVPQLIKDWPVVKQ 71

Query: 70  LLQ-LGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNV 128
            L    +LG  G   +N+  +  LQ  +A  A++I A  P VI + +  LF+ R+    +
Sbjct: 72  RLPYFFVLGSVGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIFVLNFVLFRTRVLFGQI 131

Query: 129 AGILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQ 188
           AG  L ++G A++    +P  L +   +  GD ++   V+ + IY++  R          
Sbjct: 132 AGFCLTISGVALLASHGDPLSLLQLEMNV-GDAVMLLAVLVYAIYTVILRWK-------P 183

Query: 189 TVTWSILLGT----LMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYIGYYD 244
            V W  L+       +LT   L+    + E++        + + Y G+  S +A I Y  
Sbjct: 184 AVDWRTLMAIPAFFALLTSVPLVFFEMSRESLIWPDQKGWMLVVYAGIFASLIAQILYIK 243

Query: 245 GIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNK 297
           G+ +IGA R+G+FI L P+   +    +L E L    +    + L GI +  +
Sbjct: 244 GVEQIGANRAGLFINLVPVFGTLLSVFVLSETLHTYQIAALFMALAGIAVAER 296