Pairwise Alignments

Query, 293 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 294 a.a., Protein rarD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  108 bits (270), Expect = 1e-28
 Identities = 78/289 (26%), Positives = 141/289 (48%), Gaps = 19/289 (6%)

Query: 3   KGVVLSVLASVLFAVMYYFTSLLTPLSGLEIFGWRMLLTVPCMTVFMIVSGEWRRVWELL 62
           +GV+L++ A  ++ +   +  L+  +   EI   R++ +   M   + VS +WR+V  LL
Sbjct: 8   QGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALLSVSRQWRQVKRLL 67

Query: 63  QLLAAKPRLIAGVLLSSALLGVQLWLFMWAPLNGRSLDVSVGYFLLPLTMVLTGRLVWGE 122
           +     P+ I  + LS+ L+G    LF+WA  N   L+ S+GYF+ PL  +L G +  GE
Sbjct: 68  KT----PKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFLGE 123

Query: 123 QLSYLQRIAVFFAALGVLNELYQAGGFSWATLVVIIGYPVYFIVRKYLKTDHLGGLWLDM 182
           +   +Q +AV  A  GVL +L+  G      L +   +  Y +VRK +  +   G+ ++ 
Sbjct: 124 RFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLVET 183

Query: 183 ALMLPVAWWFVQSGEQGFAVMDAHP--------KLYALIPMLGLISASALVSYIIASRLL 234
             +LPVA  ++      F + D+           L  L+   G+++   L+ +  A+  L
Sbjct: 184 LWLLPVAAIYL------FGIADSPTSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRL 237

Query: 235 AFSLFGLLSYVEPVLLLAVAL-ILGEGIKGGEWLTYIPIWLAVMVLVFE 282
             S  G   Y+ P L+  +A+   GE     + +T+  IW+A+ + V +
Sbjct: 238 RLSTLGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMD 286