Pairwise Alignments

Query, 556 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  282 bits (721), Expect = 3e-80
 Identities = 182/453 (40%), Positives = 255/453 (56%), Gaps = 45/453 (9%)

Query: 125 VSTALRGRRRQYEARDRLI----DLSESELR---LQRTLETLEQQVEERTAQL------- 170
           V    R  R +  A  RL+    D+++ + R   L R  E LE++V  RTA+L       
Sbjct: 239 VEIRARAVRDRSAANPRLVGVLSDVTDRKARQDALTRMNEILEERVAARTAELTASHAAV 298

Query: 171 -------RHNEEALRQSQKMEAVGQLTGGIAHDFNNMLTGIIGSLELLRRRVSRGKLDDL 223
                  +  EE LRQ QKME +GQLTG +AHDFNN+LT +IG+LELLR+RV+       
Sbjct: 299 LAEMEQRKRAEEQLRQVQKMETIGQLTGNVAHDFNNLLTAVIGNLELLRKRVANDPR--A 356

Query: 224 DSLIDLGVTSANRAAGLTHRLLAFSRRQSLDSKPVEINQLVVSMGELLQRSINESIKLDM 283
             L+D     A R A LT RLLAF+RRQ L  +P  +  LV    +L++RSI   I+L +
Sbjct: 357 VRLVDGACQGAQRGAALTQRLLAFARRQDLKVEPRSLTDLVSGAVDLIERSIGSRIELRL 416

Query: 284 RLTGELWTAEADPNQLESALLNLVINARDAMPGGGQLLVETSNRHLDNVFTAAYGTLTPG 343
            L+ +   A  D NQ+E ALLNLV+NARDAMP GG + +      +D+   A    L  G
Sbjct: 417 HLSQDSPPALVDANQIELALLNLVVNARDAMPNGGVVSIS-----VDHPQAAPGAGLPEG 471

Query: 344 DYVELSVSDTGCGIPENVMGRVFDPFFTTKPIGQGTGLGLSMIYGFARQSRGHVTLHSEV 403
            YV L+VSDTG G+    + +  +PFF+TK  G+GTGLGLSM++G A Q  G + L SEV
Sbjct: 472 PYVRLTVSDTGYGMDAETLEKATEPFFSTKEQGKGTGLGLSMVHGLAVQLNGALRLSSEV 531

Query: 404 GKGTTVSLFLPRFIGEITANLPADPTLPPFANAGE----TVLIVEDDPAVRVLVSAVLKE 459
           G GT   L+LP      T  L  +    P +   E     VL+V+DD  V      +L++
Sbjct: 532 GAGTRAELWLP-----ATTPLVGEEKRAPISVGREMEELNVLVVDDDFLVAFSTVEMLRD 586

Query: 460 LGYAFVEASDADTAVPIIESDQRIDLMISDVGLPGMNGRQLAEIGRQIRPDLKVLFITGY 519
           LG+  VE+S  + A+ II +D  +D+M++D  +P MNG QLA   R++RPDL +L  +GY
Sbjct: 587 LGHRVVESSSGEDALEIIRNDSTVDIMVTDFSMPRMNGAQLASAARRLRPDLPILLASGY 646

Query: 520 AE--HAAVRGGFLDPGMQLITKPFTFDLLTAKV 550
           AE    ++R       +  I KP+  + L A++
Sbjct: 647 AELPSDSIR------DLPRIAKPYQQEQLAAEI 673



 Score =  118 bits (296), Expect = 7e-31
 Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 2/155 (1%)

Query: 4   LSPLSERAIILAPLGRDGALALMMLNEAGYSGIVATDLNSLCEALAQGSGLLIIAAEALR 63
           +S    RA++LAP GRDGA+A  +L  A  + ++  DL  L   L + + L ++  +ALR
Sbjct: 3   ISNSPSRALVLAPYGRDGAIACELLASAKINSVICKDLLELESQLGEDASLAVVDEDALR 62

Query: 64  GVDLEPLLDYLHRQPAWSDLPIVLMTHHGGSEQNG--SSHLSRLLGNVTFLERPFHPVTL 121
              L+ +   L  QP+WSD+P +++T    +   G  S  L  ++ NVT LERPFHP T 
Sbjct: 63  HGYLQGVKARLAAQPSWSDIPFIILTRRAPALDQGRESMLLHDIISNVTLLERPFHPTTF 122

Query: 122 ISLVSTALRGRRRQYEARDRLIDLSESELRLQRTL 156
           +S+  TAL+GR+RQYEAR R+  L E E RL+  L
Sbjct: 123 VSVARTALKGRQRQYEARARMEQLHEGEERLRTAL 157