Pairwise Alignments

Query, 499 a.a., circadian clock protein KaiC from Pseudomonas simiae WCS417

Subject, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 255 TSGIRELDALLGGGIETGSSSLILGPAGTGKSLISMIFAAAAVARGEKAALFIFDEELGL 314
           T+   ELD +LGGG+  GS  LI G  G GKS I ++     +A G  A     +E    
Sbjct: 75  TTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTI-LLQTLCNIAVGMPALYVTGEESQQQ 133

Query: 315 LFERMKNMGIDLAALQATGNLFIEQVDAAELTPGEFSHRVRRCVDERGIKTVVIDSINGY 374
           +  R + +G+    L+      IE + A   T      RV      + I T  + S  G 
Sbjct: 134 VAMRSRRLGLPQDQLKVMTETCIETIIA---TARVEKPRVMVIDSIQTIFTEQLQSAPGG 190

Query: 375 QAAMPEENALILHMHELLLYLNRRGAATFMTVAQHGLVGDMQAPVDITYLADTVILLRYF 434
            A + E  AL      L+ Y  + G A F+ V      G +  P  + ++ DTV+   YF
Sbjct: 191 VAQVRESTAL------LVRYAKQSGTAIFL-VGHVTKEGSLAGPRVLEHMVDTVL---YF 240

Query: 435 EAIGEVR-RAISIIKKRTG 452
           E   + R R +  +K R G
Sbjct: 241 EGESDGRLRLLRAVKNRFG 259



 Score = 38.9 bits (89), Expect = 4e-07
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 19  LDDILAGGLSRSHLFLLEGEPGTGKTTVALHFLQAGAKNGETSLYITLSETEREL 73
           LD +L GGL    + L+ G+PG GK+T+ L  L      G  +LY+T  E+++++
Sbjct: 81  LDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTL-CNIAVGMPALYVTGEESQQQV 134