Pairwise Alignments

Query, 663 a.a., UDP-4-amino-4-deoxy-L-arabinose formyltransferase from Pseudomonas simiae WCS417

Subject, 311 a.a., methionyl-tRNA formyl transferase from Agrobacterium fabrum C58

 Score =  113 bits (283), Expect = 1e-29
 Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 10/283 (3%)

Query: 1   MSSKAVVFAYHDIGCAGLEALLNTGYEIAAVFTHADDPKENNFY----GSVAQLCARNGI 56
           MS + +     D     L AL+  G+EI AV+T    P            V Q+    G+
Sbjct: 1   MSLRIIFMGTPDFSVPTLRALVEAGHEIVAVYTQPPRPGGRRGLDLQKSPVHQVAELLGL 60

Query: 57  PVHAPEDANHPLWVERIAKLNPDYIFSFYYRNLLSEPLLATARNGAFNLHGSLLPKYRGR 116
           PV  P +       ++    N D      Y  LL E +L+  R G +N H SLLP++RG 
Sbjct: 61  PVLTPVNFKAEEDRQQFRDFNADVAVVVAYGLLLPEAILSGTRLGCYNGHASLLPRWRGA 120

Query: 117 APANWVLVNGESETGVTLHRMVKRADAGAILAQQKVVIDRTDTGLTLHAKLRDAASNLLR 176
           AP    ++ G++ETG+ + +M K  D G +    KV ID   T   LH  L  A + L+R
Sbjct: 121 APIQRAIMAGDAETGMMVMKMEKGLDTGPVALTAKVAIDENMTAGELHDSLMLAGARLMR 180

Query: 177 DALPQLAQGKLAETAQDESQATYFGRRTAADGKLEWKKPAEALFNLVRAVTQPYPGAFCA 236
            A+ +L    L    Q E    Y  +    + ++++ +PA+ + N +R ++ P+PGA+  
Sbjct: 181 QAMAKLEADDLPLVTQAEEGVLYAAKIDKGETRIDFSRPAQDVHNHIRGLS-PFPGAWLE 239

Query: 237 V---GEHKLIVWQAEVVKGNDGQAPGRVISVNPLRIACGEDSL 276
           +   G+ + +   A  +    G+A G  +  + L IACG D++
Sbjct: 240 MDIGGKPERVKVLASELASGMGEA-GSALD-DALTIACGSDAV 280