Pairwise Alignments

Query, 304 a.a., integrase from Pseudomonas simiae WCS417

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 21/246 (8%)

Query: 46  DWHLLQPEHVIALVAALREDGYAPNTSSLYVNAVRGVMNEAWRLNLISQEHLLRMRTVKA 105
           DW  LQ + +  L+A L   G +P + +  ++AVRG+     R  L   +    +   K 
Sbjct: 44  DWQALQIQQLRQLIARLHHHGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKG 103

Query: 106 APGTRLSQGRNLRRSLIREMMEVCAADPRPQGLRDAAVIGILYGSGMRKSESVNLDLAQI 165
               RL +  +  R+L  ++++    D      RD A++ + Y SG+R SE  NLDL  +
Sbjct: 104 E--RRLPKVLDTDRAL--QLLDG-GVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHL 158

Query: 166 NFEERSLRVIGKGNKELIKYAPDWAFAKLQAWLAFRREQLKEGEHDDSFLFNRIRRGSHI 225
           +     ++V+GKG K  +      A   LQAW   R             + N   R   I
Sbjct: 159 DLAAGLVQVLGKGGKARVLPVGRKAREALQAWYRLRG------------IGNPRDRAVFI 206

Query: 226 TRE--RITKHAIYYIARQRGQ-QVGVKIMPHDFRRSFITRVIE-EHDLSIAQKLAHHTNI 281
           TR+  RI+  A+    +  G+ ++G  + PH  R SF + V+E   DL   Q++  H +I
Sbjct: 207 TRQGNRISPRAVRLRVKVAGERELGQHLHPHMLRHSFASHVLESSQDLRAVQEMLGHADI 266

Query: 282 QTTASY 287
            TT  Y
Sbjct: 267 STTQIY 272