Pairwise Alignments

Query, 304 a.a., integrase from Pseudomonas simiae WCS417

Subject, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

 Score =  463 bits (1191), Expect = e-135
 Identities = 226/291 (77%), Positives = 253/291 (86%)

Query: 13  LTRLAPSSQLTMRYVLQDAADRLGFEDINLEDIDWHLLQPEHVIALVAALREDGYAPNTS 72
           + RLAPSSQ TMRY+LQDAADRLGF D N+ D+ WH L+P HVIALVAALR DG+APN+S
Sbjct: 1   MARLAPSSQQTMRYILQDAADRLGFVDCNIVDVPWHRLEPGHVIALVAALRADGFAPNSS 60

Query: 73  SLYVNAVRGVMNEAWRLNLISQEHLLRMRTVKAAPGTRLSQGRNLRRSLIREMMEVCAAD 132
           SLYVNA+RGVMNEAWR  LI  E LLR+R VK A G+RL  GRNLRRSLIRE+M+VCAAD
Sbjct: 61  SLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPATGSRLPPGRNLRRSLIRELMDVCAAD 120

Query: 133 PRPQGLRDAAVIGILYGSGMRKSESVNLDLAQINFEERSLRVIGKGNKELIKYAPDWAFA 192
           PRPQG+RDAA+I +LYG+GMRKSESV++DL Q++FE RSL+V+GKGN +L+KYAP WAF 
Sbjct: 121 PRPQGVRDAAIIALLYGTGMRKSESVDIDLDQVDFEARSLQVVGKGNHQLVKYAPPWAFE 180

Query: 193 KLQAWLAFRREQLKEGEHDDSFLFNRIRRGSHITRERITKHAIYYIARQRGQQVGVKIMP 252
           KLQAWL  RR+ L  G  DD FLFNRIRRG+HITR RITKHAIYYIARQRG QVGVKIMP
Sbjct: 181 KLQAWLELRRQDLPAGAEDDPFLFNRIRRGNHITRARITKHAIYYIARQRGAQVGVKIMP 240

Query: 253 HDFRRSFITRVIEEHDLSIAQKLAHHTNIQTTASYDVRDDNERRRAVDRFD 303
           HDFRR+FITRVIEEHDLSIAQKLAHH NIQTTA YD RDDNERRRAVDRFD
Sbjct: 241 HDFRRAFITRVIEEHDLSIAQKLAHHANIQTTAIYDRRDDNERRRAVDRFD 291