Pairwise Alignments

Query, 304 a.a., integrase from Pseudomonas simiae WCS417

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score = 80.1 bits (196), Expect = 6e-20
 Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 22/282 (7%)

Query: 11  LYLTR-LAPSSQLTMRYVLQDAADRLGFEDINLEDIDWHLLQPEHVIALVAALREDGYAP 69
           L+L R LA ++  + R  L+  AD L   + +L        QP  +   +A   E GY  
Sbjct: 16  LWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQA-----QPSDLQDFLAERLEGGYKA 70

Query: 70  NTSSLYVNAVRGVMNEAWRLNLISQEHLLRMRTVKAAPGTRLSQGRNLRRSLIREMMEVC 129
            +S+  ++A+R +    +R    + +         +AP +     + L + L    ++  
Sbjct: 71  TSSARLLSAMRRLFQYLYREKQRTDD--------PSAPLSSPKLPQRLPKDLTEAQVDAL 122

Query: 130 AADP---RPQGLRDAAVIGILYGSGMRKSESVNLDLAQINFEERSLRVIGKGNKELIKYA 186
            A P   +P  LRD A++ +LY +G+R SE V L ++ ++  +  +RVIGKGNKE +   
Sbjct: 123 LAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPL 182

Query: 187 PDWAFAKLQAWLAFRREQLKEGEHDDSFLFNRIRRGSHITRERITKHAIYYIARQRGQQV 246
            + A   L+ +L + R  L  G+  D    +   R   +TR+    H I + A       
Sbjct: 183 GEEAVYWLEQYLEYSRPWLLNGQTLDVLFPS--NRAQQMTRQTFW-HRIKHYATLASIDS 239

Query: 247 GVKIMPHDFRRSFITRVIEE-HDLSIAQKLAHHTNIQTTASY 287
             K+ PH  R +F T ++    DL + Q L  H+++ TT  Y
Sbjct: 240 N-KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIY 280