Pairwise Alignments

Query, 537 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 564 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Variovorax sp. SCN45

 Score =  195 bits (496), Expect = 3e-54
 Identities = 161/546 (29%), Positives = 276/546 (50%), Gaps = 52/546 (9%)

Query: 5   LRLMLLIATGLLTALIMSLAGYLGNTRMGTAVQDSELSMTALRNHMEAD---MMHDALRA 61
           LR+   +A   L+ +++ +A  + +      + D    M   R     D   M   A R 
Sbjct: 7   LRISTKLAFAFLSIVLLMIAMAVFSIHRLNRLNDQTNFMVTARMASVRDAGQMSEAANRV 66

Query: 62  DVLSAMLVGLGKSTSTKAQVSDSLKEHAEHFRQVLADNLKLPL---DNTLKANLEKIKPS 118
            +L   L     +T+  ++V+D L+  AE F+     +   P    D T ++  +++K  
Sbjct: 67  RLLEFRL-----ATAPASEVADVLRNIAEAFKTYDVVDKAYPASIGDPTEQSIYDRVKAR 121

Query: 119 LDNYISTGERIVTLALDD--PDAARGELGTFNAAFSQLEDQMATLSELIENNTQQASVGT 176
              + +   +I  L  +D   DA     G    AF  L + +A   +L+++N  +A +  
Sbjct: 122 QPAWAAAHAKIEQLVQEDRRADAVNLLNGEARDAFRALREPLA---QLVKHNEDRARIEA 178

Query: 177 RQSISVANFTLGVVLIAS----LILLLAQGRW-VILSIMGPLQTASRIADSIAHGNLSEP 231
            +S     FT G VLIAS      LL     W V   I+ PL+ A R+A+++A G+L++ 
Sbjct: 179 EESN--VTFTTGAVLIASGAGLAFLLAVLLSWSVSRGIVVPLKDAVRLAEAVAAGDLTQR 236

Query: 232 IVEPVRKDEASALIRSLATMQRDLRGMIDVVRSNAHGVNTTSEQLSHGCHEVAGSSQQQS 291
           +     KDE   L+R+LA M+ +L   +  +R ++  V T S Q++ G  +++  ++Q +
Sbjct: 237 LNSD-SKDEVGDLLRALAAMRDNLVQTLTGMRESSDSVATASAQIASGNSDLSSRTEQTA 295

Query: 292 AAASAMAAAASEMTASIEEITRHAERALAMANQAETLAKDGGQVIHQVVSDMDGIARSAQ 351
            +    AA+  E+T++++  +  A +A  +A  A  +A  GG+VI +VV  M  I  S+Q
Sbjct: 296 GSLQRTAASMEELTSTVKTASEAASQANQLALTASKIAVHGGEVISEVVETMRDIHGSSQ 355

Query: 352 QSAQVIRTLDKESEAIYSIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRN 411
           + A +I T+D              GIA QTN+LALNAA+EAARAGEQGRGFAVVA EVRN
Sbjct: 356 KIAAIIGTID--------------GIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRN 401

Query: 412 LAGRTSASTQEIASMVGRIQQSTREAVASMEEGVAQVDKGMAVTADVERSIREILQATLN 471
           LA R++ + +EI +++              E  V +V  G  +  D   ++ +I+++   
Sbjct: 402 LAQRSAVAAKEIKTLI--------------EASVDKVGSGSQLVNDAGATMGKIVESVQR 447

Query: 472 TTEMVNDISRTIGEQSLASNEIAHQVEMIAQMSESNSRVIGQTASTTDELSSLAGQLSQS 531
            +  V++IS    EQ+   ++I   V  + QM++ NS ++ ++A+  + L   A +LS  
Sbjct: 448 VSNTVSEISAGAIEQAAGIDQINSVVAQLEQMTQENSALVEESAAAAESLKGQADRLSTL 507

Query: 532 VDRFRL 537
           V+ F+L
Sbjct: 508 VEFFQL 513