Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  263 bits (673), Expect = 6e-75
 Identities = 165/443 (37%), Positives = 241/443 (54%), Gaps = 24/443 (5%)

Query: 8   LALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRNREGGRADNI-DWTQG 66
           L LA+ A I  +A A    D   + GF+EG+ +    RNYYMNR+R     D+  +W QG
Sbjct: 10  LFLAIAATIVPLAHA---ADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDDSKEWGQG 66

Query: 67  AMLNYASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGNLPTDR-HGDPEDAYGSVGAAV 125
            +  + SG+TQGT+GFG+DA+A  GLKLD      G+  LP    +G    ++ + G  +
Sbjct: 67  FLGIFESGYTQGTVGFGLDAHAMLGLKLDGGGGTDGSSILPYGSGNGKAPGSFSTAGGTL 126

Query: 126 KIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTNSGM 185
           K++   T+LK GD+    PV A G TR+LPQT  G  LT+  + G   E G  + T    
Sbjct: 127 KMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQASFTKLYN 186

Query: 186 TSNHDHDIYATYANIAANSAS----FLGGKYTFSPSLSATVYAGELEDIWRQYYTNLNYV 241
            S H   I  +Y  +  ++ S    + G  ++    L++ +YA EL+D+W QYY +L+Y 
Sbjct: 187 QSGHRR-IGTSYGALPEHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYYYDLDYT 245

Query: 242 IPLVHDQSLALDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTP 301
             +    SL    + Y T DTG +  G I+N TYSL      +  H++T ++Q+V+G+TP
Sbjct: 246 YVVNEMISLNPGLHYYHTQDTGQSLLGDIDNNTYSLHFTVD-VGHHSVTAAYQRVNGNTP 304

Query: 302 FDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYI 361
           FDYI  G        DSVYL NS Q+ DFNGP E+SW ++Y  N    G+PGL+    YI
Sbjct: 305 FDYIAQG--------DSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSYI 356

Query: 362 NGSDINGTHTPDHSAYAGDY---GDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAAN 418
           +G        P    Y+  Y   G D  H E D++ KYV+Q G AK+L++R++ A    +
Sbjct: 357 SGKTDLTKVDPQSRGYSAWYSADGKDAKHWERDIDLKYVVQGGKAKDLAVRLQWATNRGS 416

Query: 419 ADQR--DGDLNELRLIVDYPFTL 439
                 D D++E R+IVDYP  +
Sbjct: 417 NGYSAVDRDVDEYRVIVDYPINV 439