Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  286 bits (732), Expect = 9e-82
 Identities = 173/449 (38%), Positives = 251/449 (55%), Gaps = 33/449 (7%)

Query: 8   LALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRNREGGRADNID----- 62
           L L++CA +   A A     Q   +GFIEGS+V  L RN+Y NR+   G++         
Sbjct: 8   LHLSLCAALPFTAVAA----QDPPEGFIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSE 63

Query: 63  -WTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDA-THADAGTGN---LPTDRHGDPEDA 117
            W QG +  + SGFTQGT+GFG+DA+A  G+KLD+ T    G G+   LP D    PED 
Sbjct: 64  AWAQGLIGRFESGFTQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDN 123

Query: 118 YGSVGAAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGH 177
           Y  VG A K++V  T +K GD+ P  PV A G +R+LP++  G    ++ + GL L+ G 
Sbjct: 124 YSKVGGAAKLRVLDTVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGR 183

Query: 178 FTSTNSGMTSNHDHDIYATYAN-IAANSASFLGGKYTFSPSLSATVYAGELEDIWRQYYT 236
            T  +    S  D      YA  + +    + GG YT + +LS ++Y+  L+D W QYY 
Sbjct: 184 LTGMSQPAQSGMDKGFATFYAGPVDSPWIGYFGGDYTVNKNLSFSLYSSRLKDAWDQYYF 243

Query: 237 NLNYVIPLVHDQSLALDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKV 296
                 PL  + SL  D N Y+ +D G  + GA +N  +S       + AH+L +S Q+ 
Sbjct: 244 GSAARYPLNDEVSLFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVK-VGAHSLAVSHQRN 302

Query: 297 HGDTPFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSF 356
           +GD  FDY+           DS++L NS+Q+ DFN P E+SW +RYDL+M ++G+PGLSF
Sbjct: 303 NGDDDFDYL--------RQSDSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSF 354

Query: 357 MGRYINGSDINGTHTPDHSAY-----AGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVR 411
           M RY  GS     ++  ++ Y     AG+   D    E D+EA YV+Q+G  K+LSLR+R
Sbjct: 355 MTRYGKGS--GADYSNANAVYMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLR 412

Query: 412 DAIVAANADQRDGDLNELRLIVDYPFTLL 440
            A V ++A   + DL E+R+IV+YP  +L
Sbjct: 413 QATVRSSA--FESDLEEVRVIVEYPIAVL 439