Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 430 a.a., porin from Pseudomonas simiae WCS417

 Score =  235 bits (600), Expect = 2e-66
 Identities = 154/448 (34%), Positives = 226/448 (50%), Gaps = 45/448 (10%)

Query: 2   IKQSSLLALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRN-REGGRADN 60
           + Q++L + A  AG S ++ A           F E SS T   RN Y NR+ R+G  A  
Sbjct: 17  LTQTALASAATLAGFSPLSQA----------AFFEDSSATLETRNMYFNRDFRDGTSAQQ 66

Query: 61  I---DWTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPEDA 117
               +W QG MLN  SG+T GT+GFGVDA    G+KLD++    GTG LPT   G   D 
Sbjct: 67  SKRDEWAQGFMLNLQSGYTDGTVGFGVDALGMLGVKLDSSPDRTGTGLLPTHDDGRAADE 126

Query: 118 YGSVGAAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGH 177
           Y  +G   K+K+S T+LK G + P  P+      R+LPQT  G  +TS E   L    G 
Sbjct: 127 YSKLGLTGKVKISATELKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGR 186

Query: 178 FTSTNSGMTSNHDHDIYATYAN------IAANSASFLGGKYTFSPSLSATVYAGELEDIW 231
                    +N++ DI     N            +F G  Y F+  ++ + +  +L+D++
Sbjct: 187 LDKAKDRDDTNYE-DIALNNKNSRFVSGATGKHFNFGGADYQFADKITGSYHFAQLDDVY 245

Query: 232 RQYYTNLNYVIPLVHDQSLALDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTL 291
           RQ++  L    P+    +   D  L  + DTG+A+ G I+NT+ +   +Y+ L  H L+ 
Sbjct: 246 RQHFLGLVASRPM-GPGTFGTDLRLAISDDTGAARGGKIDNTSLNGLFSYA-LNGHKLSA 303

Query: 292 SFQKVHGDTPFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGV 351
            +Q + GD+ F Y+          G   YL N VQ  DF G  E+SW  RYD + A  G+
Sbjct: 304 GYQHMSGDSAFPYV---------DGSDPYLVNFVQINDFAGAEERSWQARYDFDFAKLGI 354

Query: 352 PGLSFMGRYINGSDINGTHTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVR 411
           PGLSFM RY++G +I   +           G+ G   E + E KYV+Q+G  K++++R+R
Sbjct: 355 PGLSFMSRYLSGDNIKLKN-----------GETGKEWERNSEIKYVVQTGTFKDVAVRLR 403

Query: 412 DAIVAANADQRDGDLNELRLIVDYPFTL 439
           +A   +N   RD D  E+RL+V Y   L
Sbjct: 404 NATYRSNYSARDAD--EMRLLVSYSVAL 429