Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  216 bits (550), Expect = 1e-60
 Identities = 137/411 (33%), Positives = 210/411 (51%), Gaps = 18/411 (4%)

Query: 31  SKGFIEGSSVTGLLRNYYMNRN-REGG--RADNIDWTQGAMLNYASGFTQGTIGFGVDAY 87
           S  F+E    +  LRN+Y NR+ R  G  ++   +W QG +LN  SGFT+G +GFG+DA 
Sbjct: 22  SAAFVEDFKGSLELRNFYYNRDFRNDGATQSKRDEWAQGFILNLQSGFTEGPVGFGIDAM 81

Query: 88  AYGGLKLDATHADAGTGNLPTDRHGDPEDAYGSVGAAVKIKVSKTQLKFGDMQPTAPVFA 147
              G+KLD++    G+G L  D     ED YG   A  K ++ KT+L+ G + P  P+  
Sbjct: 82  GLLGVKLDSSPDRTGSGLLAYDSDRQVEDEYGKFVATAKARMGKTELRIGGVNPLMPLLW 141

Query: 148 TGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTNSGMTSNHDHDIYATYANIAANSASF 207
           +  +RLLPQ   G  LT ++I  L + A    +     +++ +      YA + A+  ++
Sbjct: 142 SNNSRLLPQVFRGGSLTVNDIDKLTVTATRINAVKQRNSTDFESLTATGYAPVEADHYNY 201

Query: 208 LGGKYTFSPSLSATVYAGELEDIWRQYYTNLNYVIPLVHDQSLALDGNLYRTLDTGSAKA 267
           L   +  +  ++ +++A ELED+++ Y+  +  + PL     +A D  ++   +TGS K 
Sbjct: 202 LAFDFKPAKDMTFSLHAAELEDLYKSYFAGIKVIKPLWEGNVIA-DVRVFDASETGSKKL 260

Query: 268 GAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTGNNGAGEGGDSVYLANSVQW 327
           G ++N T S   AYS ++ HT+   +QK  GDT F ++          G   YL      
Sbjct: 261 GEVDNRTLSSYFAYS-IKGHTIGGGYQKAWGDTSFAFV---------NGTDTYLFGESLV 310

Query: 328 GDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDIN-GTHTPDHSAYAGDYGDDGA 386
             F  P E+ W  RYD + A+ GVPGL F  RY+ G D+N    T   +A     G+DG 
Sbjct: 311 STFTAPEERVWFARYDFDFAALGVPGLLFTTRYMKGDDVNPDLLTSRQAASLRLNGEDGK 370

Query: 387 HHETDLEAKYVIQSGPAKNLSLRVRDAIVAANADQRDGDLNELRLIVDYPF 437
             E   +  YVIQSGPAK +S + R+   + N        NE RLI+ Y F
Sbjct: 371 EWERVTDISYVIQSGPAKGVSFQWRN---STNRSTYADSANENRLIMRYTF 418