Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  207 bits (526), Expect = 7e-58
 Identities = 139/410 (33%), Positives = 206/410 (50%), Gaps = 29/410 (7%)

Query: 34  FIEGSSVTGLLRNYYMNRNREGGRADNI---DWTQGAMLNYASGFTQGTIGFGVDAYAYG 90
           FI  S     LRN+Y+NR+     A      +W QG      SGFT+G +GFGVDA    
Sbjct: 32  FIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEGPVGFGVDALGQL 91

Query: 91  GLKLDATHADAGTGNLPTDRHG-DPEDAYGSVGAAVKIKVSKTQLKFGDMQPTAPVFATG 149
           G+KLD++     TG LP   +  +P D Y  +G   K++VSK+ L+ G +QP  PV    
Sbjct: 92  GIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRLGTLQPILPVVVYN 151

Query: 150 GTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTNSGMTSNHDHDIYATYANIAANSASFLG 209
            TRLL  +  G  LTS ++ GL   AG  T  N   +S  D DI   Y   +++   F G
Sbjct: 152 DTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRD-DI--GYGAASSDHLDFGG 208

Query: 210 GKYTFSPSLSATVYAGELEDIWRQYYTNLNYVIPLVHDQSLALDGNLYRTLDTGSAKAGA 269
           G Y  +P  + + Y  +L+DI+RQ +  L    PL    SL  D   + + + G+ +AG 
Sbjct: 209 GSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYFDSRNDGAERAGN 268

Query: 270 INNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTGNNGAGEGGDSVYLANSVQWGD 329
           I+N  ++       ++AH  T ++Q++ GD+ F ++         GGD  +  N V +  
Sbjct: 269 IDNRNFNAMFTLG-VRAHKFTATWQQMSGDSAFPFV--------NGGDP-FTVNLVTYNT 318

Query: 330 FNGPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDINGTHTPDHSAYAGDYGDDGAHHE 389
           F   G  SW +RYD +  + G+PGLSFM RY +G          H+  A     +G   E
Sbjct: 319 FTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGR---------HAETA--TVTNGRERE 367

Query: 390 TDLEAKYVIQSGPAKNLSLRVRDAIVAANADQRDGDLNELRLIVDYPFTL 439
            D +  YVIQSGP K++SLR R+ +   + +     ++E RLI+ Y   L
Sbjct: 368 RDTDITYVIQSGPFKDVSLRWRN-VTFRSGNGLTNAVDENRLIIGYTLAL 416