Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  213 bits (542), Expect = 9e-60
 Identities = 146/436 (33%), Positives = 218/436 (50%), Gaps = 46/436 (10%)

Query: 16  ISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRNREG----GRADNIDWTQGAMLNY 71
           +   A A S+  QA ++GF++ +  +  LRN+YMNR+  G    G+A+  +WTQ  + ++
Sbjct: 10  VPTFALAASLPLQALAEGFVDDAKASLTLRNFYMNRDYTGTASQGKAE--EWTQSFIFDF 67

Query: 72  ASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPEDAYGSVGAAVKIKVSK 131
            SG+T G +GFGVD      +KLD     AGT  LP    G P D +G    A K++VS+
Sbjct: 68  KSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGTQLLPVHDDGRPADDFGRTALAGKMRVSR 127

Query: 132 TQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTNSGMTSNHDH 191
           T+LK G+  PT P+      R LPQT  G  +TS+E+AGL L  G F   +    ++   
Sbjct: 128 TELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASMQD 187

Query: 192 DIYATYANIAANSASFLGGKYTFSPSLSAT-VYAGELEDIWRQYYTNLNYVIPLVHDQSL 250
               T     ++  +F GG+Y F+   +    +  +LEDI++Q Y  + +  PL    + 
Sbjct: 188 MSLFTRTAFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPL---GNW 244

Query: 251 ALDGNL--YRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTG 308
            L  NL  +   D G AKAG +NN T S     + L  +T  +  QKV GD  +  +   
Sbjct: 245 VLGANLGYFWGKDDGGAKAGELNNRTAS-GLFSAKLGGNTFYVGLQKVMGDDEWFRV--- 300

Query: 309 NNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDING 368
            NGA  G     LAN      +    E+SW +R+D N    G+PGL+ M RYI+G +++ 
Sbjct: 301 -NGASGG----TLANDAFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYIHGYNVHN 355

Query: 369 THTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAANADQRD----G 424
             T    +                E  YV+QSGP K L+L+ R+     ++ +RD     
Sbjct: 356 ASTQGRES----------------ELAYVVQSGPFKALNLKWRN-----SSQRRDWGSTN 394

Query: 425 DLNELRLIVDYPFTLL 440
             +E RLIV YP +LL
Sbjct: 395 SFDENRLIVSYPLSLL 410