Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  234 bits (597), Expect = 4e-66
 Identities = 157/445 (35%), Positives = 234/445 (52%), Gaps = 49/445 (11%)

Query: 5   SSLLALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRN-REGGRADNI-- 61
           +S LALA  A +SQ AF              E S+ T   RN Y NR+ R+G  A     
Sbjct: 23  ASALALAGVAPMSQAAF-------------FEDSTATFETRNMYFNRDFRDGTSAQQSKR 69

Query: 62  -DWTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPEDAYGS 120
            +W QG +LN+ SG+T GT+GFG+DA    G+KLD++     +G LPT   G   D Y  
Sbjct: 70  DEWAQGFILNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSK 129

Query: 121 VGAAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTS 180
           +G   K+K+S+T+LK G + P  P       R+LPQT  G  LTS EI GL    G    
Sbjct: 130 LGLTGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDK 189

Query: 181 TNSGMTSNHDHDIYATYAN------IAANSASFLGGKYTFSPSLSATVYAGELEDIWRQY 234
                 +N + D+     N       +A++ +  G  Y F+  ++ + +  +L+DI+RQ+
Sbjct: 190 AKDRNDTNWE-DLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQH 248

Query: 235 YTNLNYVIPLVHDQSLALDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQ 294
           +  +    P     +L  D  L  + D G+AKAG I+NTT +   +Y+ L  H ++ ++Q
Sbjct: 249 FIGMVATQPW-GPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYA-LGGHKVSAAWQ 306

Query: 295 KVHGDTPFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGL 354
           ++ G++ F Y+        +G D  YL N VQ  DF G  E+SW  RYD N A+ GVPGL
Sbjct: 307 QLSGESAFPYV--------DGADP-YLVNFVQINDFAGADERSWQARYDYNFAALGVPGL 357

Query: 355 SFMGRYINGSDINGTHTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAI 414
           +FM RYI+G +++              G +G   E + E KYV+QSGP KN+++R+R+A 
Sbjct: 358 TFMTRYISGDNVSRA-----------AGGEGKEWERNTELKYVVQSGPLKNVAVRLRNAT 406

Query: 415 VAANADQRDGDLNELRLIVDYPFTL 439
             +N  +   D +E+RL+V Y   L
Sbjct: 407 FRSNFAR---DADEVRLLVSYSVAL 428