Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  270 bits (691), Expect = 5e-77
 Identities = 174/434 (40%), Positives = 238/434 (54%), Gaps = 28/434 (6%)

Query: 22  AESVTDQADSKGFIEGSSVTGLLRNYYMNR-NREGGRADNIDWTQGAMLNYASGFTQGTI 80
           A++  D+AD  GFIEGSS     RN Y NR N   G  D  +W QGA+  + SG+T G +
Sbjct: 22  AQADEDKAD--GFIEGSSFNLHFRNAYFNRDNHNAGVRDTREWGQGAVARFESGYTPGVV 79

Query: 81  GFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPE-----DAYGSVGAAVKIKVSKTQLK 135
           GFG+DA+A  GLKLD     AGT  LP     D E      ++ + GAAVK+K   T+LK
Sbjct: 80  GFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELK 139

Query: 136 FGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTNSGMTSNHDHDIYA 195
            GD+  T PV A G TR+LPQT  G  LT++ I GL LE G  + T+    S H   I  
Sbjct: 140 AGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGH-RRIDT 198

Query: 196 TYANIAANSAS----FLGGKYTFSPSLSATVYAGELEDIWRQYYTNLNYVIPLVHDQSLA 251
            Y ++  +  S    + G  ++ +  ++A +YA EL+DIW QYY + +Y   +    SL 
Sbjct: 199 YYGSLDEHDKSKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTYVVNDLVSLN 258

Query: 252 LDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTGNNG 311
              + Y T DTG A  G I+N TYS+    +    H++T ++Q+V+G+TPFDYI      
Sbjct: 259 PGVHFYHTQDTGQALLGKIDNNTYSVHFTVN-AGFHSVTAAYQRVNGNTPFDYINL---- 313

Query: 312 AGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYING-SDI-NGT 369
               GDSVYL NS  + DFN P E+SW ++Y  + A  GVPGLS    Y  G +D+   T
Sbjct: 314 ----GDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLTKAT 369

Query: 370 HTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAAN----ADQRDGD 425
               H  Y  + G +  H E DL+ KYV Q G  K+LS+ VR A    +    +   + D
Sbjct: 370 QDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDSNSD 429

Query: 426 LNELRLIVDYPFTL 439
            +ELR+IVDYP  +
Sbjct: 430 NDELRVIVDYPLNV 443