Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  295 bits (756), Expect = 2e-84
 Identities = 170/450 (37%), Positives = 254/450 (56%), Gaps = 35/450 (7%)

Query: 14  AGISQMAFAESVTDQADSK--GFIEGSSVTGLLRNYYMNRNREGGRADNID--------- 62
           A +S ++ + +++ QA+ K  GFIEGSS+T L RN+Y NR+     A   +         
Sbjct: 10  AAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGY 69

Query: 63  ---WTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGN----LPTDRHGDPE 115
              W    +  + SGFTQGT+GFGVDA+A  GLKLD      G  +    LP D  G+  
Sbjct: 70  SEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKGEAR 129

Query: 116 DAYGSVGAAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEA 175
           D Y  VG A K+++  T +K GD+ P+ PV A+G +RLLP++  G  + ++ I GL L+ 
Sbjct: 130 DEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQG 189

Query: 176 GHFTSTNSGMTSNHDHDIYATYANIAANSA--SFLGGKYTFSPSLSATVYAGELEDIWRQ 233
           G   + +  ++SN + D + T+     NS    + GG Y+ + + + +VYA +L+D+W Q
Sbjct: 190 GRLHAMSQPVSSNLN-DNFVTFYGGPVNSPWIGYGGGDYSINDNWTVSVYASQLKDVWNQ 248

Query: 234 YYTNLNYVIPLVHDQSLALDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSF 293
           YY   + V PL  D +L    N Y+ +D G  + G  +N  +S      +  AHTL LS 
Sbjct: 249 YYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRY-GAHTLALSH 307

Query: 294 QKVHGDTPFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPG 353
           Q+ +GD  FDY+           DS+++ NS+Q+ DFN P E+SW +RYDLN  SYG+PG
Sbjct: 308 QRNNGDDDFDYL--------RQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPG 359

Query: 354 LSFMGRYINGSDINGTHTPDHSAYAGDYG---DDGAHHETDLEAKYVIQSGPAKNLSLRV 410
           L+FM RY  GS  + ++         D G   D+    E D+E KYV+Q+GPAK+LS R+
Sbjct: 360 LTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRL 419

Query: 411 RDAIVAANADQRDGDLNELRLIVDYPFTLL 440
           R A   A A   + DL+E R+I++YP ++L
Sbjct: 420 RQATTRATA--FESDLDETRVIIEYPLSIL 447