Pairwise Alignments

Query, 300 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 8e-17
 Identities = 76/283 (26%), Positives = 118/283 (41%), Gaps = 15/283 (5%)

Query: 6   RRGSWEMIAAMLISGTIG-WFVLVSGVSVIEV----VFWRCVIGGLTLLLVCALLGYLRL 60
           RRG    ++A +I G    +F  +  V  +E+    V W  + G L LLLV    G+ R 
Sbjct: 7   RRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSL-LLLVWKHPGWWRE 65

Query: 61  DLLNGAKLGLAMLSGVAIVGNWLLLFESYSRASIAISTAVYNVQPFMLVMLAAVFLGEKI 120
              N  +LG+  LSG  I GNWL    S +   +  ++  Y + P + V+L  + LGE++
Sbjct: 66  LRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLILGERL 125

Query: 121 TVQKLAWLSIAFLGMLAIVTAHGDQQTGDDYLAGIALALGAAFLYAIAALI-IKRLKEVP 179
             ++L WL++   GM A+  A    Q G      + LAL   F   I     +  L  + 
Sbjct: 126 --RRLQWLAV---GMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180

Query: 180 PHLMALIQVTTGALLLAPMVPWNSLPATTNAWAALVTLGVVHTGLMYVLLYGAIQKLPTA 239
                L+ +  G LLL P          T++ A  +      T +  V    A + LP  
Sbjct: 181 VETWMLVPLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240

Query: 240 ITGALSFIYPIAAIFVDWIAFGHRLGWLQWLGVAAILLAAAGL 282
             G L ++ P   +    + F   L       +AA +   AGL
Sbjct: 241 TLGFLQYLAPTLVLLQAVVLFDEHLSSST---LAAFMFIWAGL 280