Pairwise Alignments

Query, 300 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 319 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 16/254 (6%)

Query: 30  GVSVIEVVFWRCVIGGLTLLLVCALLGYLRLDL-LNGAKLGLAMLSGVAIVGNWLLLFES 88
           G  V+  +  R    G TLL++  L+ + R  L L        +L G+ I    L L+ +
Sbjct: 44  GAGVLLAILMR---SGGTLLVLAILVLWQRQSLRLPTGAWRWQLLLGLLITAQSLCLYSA 100

Query: 89  YSRASIAISTAVYNVQPFMLVMLAAVFLGEKITVQKLAWLSIAFLGMLAIVTAHG----D 144
            +R  +A++  V NV P +L +L     G + + +    + +  +G++ ++   G     
Sbjct: 101 VARVPVALALLVANVFPILLALLTWALGGPRPSARTAMLMGLILVGLVFVLDVPGRLSDS 160

Query: 145 QQTGDDYLAGIALALGAAFLYAIAALIIK-RLKEVPPHLMALIQV------TTGALLLAP 197
              G ++L G+ALA  AA ++A A  I   +L +V   + +L+ +         A L   
Sbjct: 161 ASVGPEWLLGVALAFCAASVFACALWITDHKLSQVRGSVRSLLTIFIVFSSVNLAGLTGA 220

Query: 198 MVPWNSLPATTNAWAALVTLGVVHTGLMYVLLYGAIQKLPTAITGALSFIYPIAAIFVDW 257
           +    +LPAT+  W AL TL V++ G  +++L+ ++ +L       +  I P+A + + W
Sbjct: 221 LPGGLNLPATSTGWLALATLVVLY-GTGFIVLFISVPRLDMPRNAPVMNIEPLATLLMGW 279

Query: 258 IAFGHRLGWLQWLG 271
           I     L   Q +G
Sbjct: 280 IVLDQMLSRGQIVG 293