Pairwise Alignments

Query, 300 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 294 a.a., EamA family transporter RarD from Pseudomonas fluorescens SBW25

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 74/271 (27%), Positives = 117/271 (43%), Gaps = 24/271 (8%)

Query: 6   RRGSWEMIAAMLISGTIG-WFVLVSGVSVIEV----VFWRCVIGGLTLLLVCALLGYLRL 60
           R+G    ++A +I G    +F  ++ V   E+    V W  + G L LL+V    G+ R 
Sbjct: 7   RKGYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGAL-LLMVWKHPGWFRE 65

Query: 61  DLLNGAKLGLAMLSGVAIVGNWLLLFESYSRASIAISTAVYNVQPFMLVMLAAVFLGEKI 120
              N  +L +  LSG  I GNWL    S +   +  ++  Y + P + V+L  + LGE++
Sbjct: 66  LRDNPKRLAILALSGSLIAGNWLTYVWSVNSGRMLEASLGYYINPLVNVVLGMLILGERL 125

Query: 121 TVQKLAWLSIAFLGMLAIVTAHGDQQTGDDYLAGIALALGAAFLYAIAALI-IKRLKEVP 179
             ++L W+++   G+ A+  A    Q G      + LAL   F   I     +K L  + 
Sbjct: 126 --RRLQWVAV---GLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180

Query: 180 PHLMALIQVTTGALLLAP------MVPWNSLPATTNAWAALVTLGVVHTGLMYVLLYGAI 233
                L+ +    LL  P      MV W    +T+ AW  LV  G V T +  V    A 
Sbjct: 181 VETWMLVPIAVAWLLFNPSAHSAQMVFW----STSEAW-WLVAAGPV-TLIPLVCFNAAA 234

Query: 234 QKLPTAITGALSFIYPIAAIFVDWIAFGHRL 264
           + LP    G L ++ P   +    + FG  L
Sbjct: 235 RHLPYTALGFLQYVAPTLVLLEAVLLFGEHL 265



 Score = 30.4 bits (67), Expect = 5e-05
 Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 154 GIALALGAAFLYAIAALIIKRLKEVPPHLMALIQVTTGALLLAPMVP-------WNSLPA 206
           G  L L A  ++ +  L  K +  VP   + + +V   AL  A ++        +  L  
Sbjct: 9   GYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGALLLMVWKHPGWFRELRD 68

Query: 207 TTNAWAALVTLGVVHTG--LMYVLLYGAIQKLPTAITGALSFIYPIAAIFVDWIAFGHRL 264
                A L   G +  G  L YV    + + L  ++     +I P+  + +  +  G RL
Sbjct: 69  NPKRLAILALSGSLIAGNWLTYVWSVNSGRMLEASLG---YYINPLVNVVLGMLILGERL 125

Query: 265 GWLQWLGVAAILLAAAGLQRGWW 287
             LQW+ V    LAA G+ +  W
Sbjct: 126 RRLQWVAVG---LAAVGVAQQVW 145