Pairwise Alignments

Query, 300 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 311 a.a., DMT family transporter from Pseudomonas fluorescens SBW25

 Score = 76.3 bits (186), Expect = 9e-19
 Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 16/254 (6%)

Query: 30  GVSVIEVVFWRCVIGGLTLLLVCALLGYLRLDL-LNGAKLGLAMLSGVAIVGNWLLLFES 88
           G  V+  +  R    G TLL++  L+ + R +L L        +L G+ I    L L+ +
Sbjct: 44  GAGVLLAILMR---SGGTLLVLAVLVLWQRQNLRLPAGAWRWQVLLGLLIATQSLCLYSA 100

Query: 89  YSRASIAISTAVYNVQPFMLVMLAAVFLGEKITVQKLAWLSIAFLGMLAIVTAHG----D 144
            +R  +A++  V NV P +L +L   F G + T +    + +  +G++ ++   G     
Sbjct: 101 VARVPVALALLVGNVFPILLALLTWAFGGPRPTARTALLMGLILVGLVFVLDVPGRLSSS 160

Query: 145 QQTGDDYLAGIALALGAAFLYAIAALIIK-RLKEVPPHLMALIQV-----TTGALLLAPM 198
            + G  +L G++LA  AAF++A A  I   +L +V   + +L+ +     +     L+  
Sbjct: 161 AEIGPQWLLGVSLAFCAAFVFACALWITDHKLSQVRGSVRSLLTIFIVFSSVNLAGLSGA 220

Query: 199 VPWN-SLPATTNAWAALVTLGVVHTGLMYVLLYGAIQKLPTAITGALSFIYPIAAIFVDW 257
           +P   + PA++  W AL TL V++ G  +++L+ ++ +L       +  I P+A + + W
Sbjct: 221 LPGGLNPPASSTGWLALATLVVLY-GTGFIVLFMSVPRLDMPRNAPVMNIEPLATLLMGW 279

Query: 258 IAFGHRLGWLQWLG 271
           I     L   Q LG
Sbjct: 280 IVLDQMLNAGQMLG 293



 Score = 24.6 bits (52), Expect = 0.003
 Identities = 14/70 (20%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 70  LAMLSGVAIVGN-WLLLFESYSRASIAISTAVYNVQPFMLVMLAAVFLGEKITVQKLAWL 128
           LA+ + V + G  +++LF S  R  +  +  V N++P   +++  + L + +   ++   
Sbjct: 235 LALATLVVLYGTGFIVLFMSVPRLDMPRNAPVMNIEPLATLLMGWIVLDQMLNAGQMLGG 294

Query: 129 SIAFLGMLAI 138
            I   G++ +
Sbjct: 295 VIVVTGIVLL 304