Pairwise Alignments

Query, 333 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  195 bits (496), Expect = 1e-54
 Identities = 113/331 (34%), Positives = 183/331 (55%), Gaps = 4/331 (1%)

Query: 1   MVTMDDVASRAGVSTSTVSHVLNGTRKVSPATVLAVQQAIQALGYIPNTLARSLARSSTN 60
           M T+ DVA+ AG+S +TVSHVLN TR VS    L V+ AI  L Y+P+ +ARSL   ST 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  TMGVAISALSNHYFSETVHAIETECAKNGYMMLFVDTHDDPEQELRVVTALHHRRVDGIV 120
           T+G+ +    N YF+E    IE  C +NGY ++  ++ D+P+++   +  L  +R+DG+V
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 LAP-SNGSKALEYLRANEIPAVLVDRMMSD-QFDQIGVDNAQPTQALIQHLIAHGHRRIG 178
           +A        L+ L +   P V+VDR +     D + +D+ Q      +HL+  GHR + 
Sbjct: 121 VASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVA 180

Query: 179 FIAGREGFSTTDERVAGYRAALLAAGLAFDPQLLVNGGSNTEPARKATVQLLGLAAPPTA 238
           +I G      T  R++G+R A+  AG       +++    +     A  Q+L     P+A
Sbjct: 181 YIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE-GKRPSA 239

Query: 239 IMAGNNLMTLGAMQALRDAQITVPGQMALVGFDDFDWADFFEPRLTLIAQPVQALGAQAV 298
           I AGN+++  G ++A  +  I+VPG+++++GFDD + + +  P LT + Q ++ LG  A 
Sbjct: 240 IFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESAA 299

Query: 299 HLLLQRMASPDAPPHSVRL-TPTLQVRNSCG 328
            LLL R+A+P       R+  P + +R S G
Sbjct: 300 SLLLTRIATPRQGAAEQRIVAPRIVLRESTG 330