Pairwise Alignments

Query, 333 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  176 bits (447), Expect = 6e-49
 Identities = 105/326 (32%), Positives = 168/326 (51%), Gaps = 2/326 (0%)

Query: 3   TMDDVASRAGVSTSTVSHVLNGTRKVSPATVLAVQQAIQALGYIPNTLARSLARSSTNTM 62
           TM DVA +A VST+TVS  L    KVS AT   V++A + +GY+P  + R++ R+ + T+
Sbjct: 11  TMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTI 70

Query: 63  GVAISALSNHYFSETVHAIETECAKNGYMMLFVDTHDDPEQELRVVTALHHRRVDGIVLA 122
            V +  + + +FSE +  IE   A +GY++L  D     +QE   +  +  +++DG++L 
Sbjct: 71  LVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLL 130

Query: 123 PSNGSKALEYLRANEIPAVLVDRMMSDQFD--QIGVDNAQPTQALIQHLIAHGHRRIGFI 180
            S             +P +++    + + +   + +DN       + +L   GH+RIG I
Sbjct: 131 GSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCI 190

Query: 181 AGREGFSTTDERVAGYRAALLAAGLAFDPQLLVNGGSNTEPARKATVQLLGLAAPPTAIM 240
           AG E       R+ GY  AL   G+  DPQ +  G    E   KA  QLL L  PPTA+ 
Sbjct: 191 AGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAVF 250

Query: 241 AGNNLMTLGAMQALRDAQITVPGQMALVGFDDFDWADFFEPRLTLIAQPVQALGAQAVHL 300
             +++M LGA+   +   + VP  ++++GFD+ D   F +P LT IAQP   +G +A+ L
Sbjct: 251 CHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLL 310

Query: 301 LLQRMASPDAPPHSVRLTPTLQVRNS 326
           LL +M        S  +   L +R S
Sbjct: 311 LLDQMQGQHVGSGSRLMDCELIIRGS 336