Pairwise Alignments

Query, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 513 a.a., D-xylose ABC transporter, ATP-binding protein from Enterobacter asburiae PDN3

 Score =  379 bits (973), Expect = e-109
 Identities = 216/513 (42%), Positives = 323/513 (62%), Gaps = 19/513 (3%)

Query: 6   LLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAY-QADPGGEI 64
           LLEM+ I+K F  ++ +  V L++ PGE+ +L GENG+GKSTLMK+L G Y      GEI
Sbjct: 4   LLEMKSITKRFGMVKAVDNVSLRLNPGEVVSLCGENGSGKSTLMKVLCGIYPHGSYEGEI 63

Query: 65  RIAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRRGWTIDRKGMEAGC 124
             AG++I        +  GIA+I+QEL+L  +L+V ENI+LG E+     +D   M   C
Sbjct: 64  VFAGEVIQATHIRDTERKGIAIIHQELALVKHLTVLENIFLGAEISHRGVLDYDTMTLRC 123

Query: 125 IEVLQRLGAEFTPATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRLFA 184
            ++L ++    +P TRV  L + ++QLVEIA+AL+   ++L++DEPT  L+ +ET  L  
Sbjct: 124 EKLLAQVSLNISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETAVLLN 183

Query: 185 LIKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMMVGRDL 244
           +I+ L++ G+A IYISH++ E+ A+SD + V+RDG +IG      +S + ++ MMVGR+L
Sbjct: 184 IIRDLQNHGIACIYISHKLNEVKAISDTICVIRDGQHIGTREAAGMSEDDIITMMVGREL 243

Query: 245 SGFYKKEHAAYNPGNVVMRVRDMADG-------KRVRHCSFDLHAGEVLGIAGLVGAGRT 297
           +  Y  E  A   G+ V+RV ++          KRV + SF LH+GE+LGIAGLVGAGRT
Sbjct: 244 TALYPNEPHA--TGDEVLRVENLTAWHPVNRHIKRVNNVSFALHSGEILGIAGLVGAGRT 301

Query: 298 ELARLIFAADP-RTSGTLEVVGKAVTPLRTPADAIRAGVVYLTEDRKAQGLFLDMSVADN 356
           E  + +F   P R  GT+ + G+ V  +     AI  G+  + EDRK  G+   M+V  N
Sbjct: 302 EAVQCLFGVWPGRWEGTIYIDGQPV-KIDNCQQAIARGIAMVPEDRKKDGIVPVMAVGKN 360

Query: 357 INVCACVPDAHAGGVLDRDHALQRS--NDAIKSLSIRVASGKVNAGALSGGNQQKVLLAR 414
           I + A   D  +G +   D A ++     ++  L ++ +S ++  G LSGGNQQK +LAR
Sbjct: 361 ITLAAL--DRFSGALSSLDDAAEQQCILQSLARLKVKTSSPELAIGRLSGGNQQKAILAR 418

Query: 415 LLEVKPHVLILDEPTRGVDIGSKSEIYRIINQLAQAGIGIVVISSELPEIIGTCDRVLIM 474
            L + P +LILDEPTRG+DIG+K EIY++INQL Q GI ++VISSELPE++G  DRVL+M
Sbjct: 419 CLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVM 478

Query: 475 REGQLVAEVGGASGQAISQERIIDLATGGDQVV 507
            EG+L A +     Q ++QE++++ A   ++ V
Sbjct: 479 HEGKLKANL---INQNLTQEQVMEAALRSERHV 508