Pairwise Alignments

Query, 285 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 273 a.a., transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  303 bits (777), Expect = 2e-87
 Identities = 150/272 (55%), Positives = 202/272 (74%), Gaps = 6/272 (2%)

Query: 1   MDRLSTLLVHFGIGADTFHSGPLHGALDTRDLQQR--GRVYLLKEGQASLEMPDGT-LRI 57
           MDRLSTLL HF + A  FH G   G   T  L Q   G  +LL+ G+ + +   G  + +
Sbjct: 1   MDRLSTLLKHFNLHASAFHQG---GFCGTTHLGQHSVGHAHLLRSGRLAFKDKRGQRIEL 57

Query: 58  PEPSLVLVPRPLPHRLVAAKAERAQVVAASLRFDGGIDNPLSVALTDTIVMPLQQIPMIA 117
            EP+L+L  RP  H L+A  A+ A++V A+L+FDGG +NPL++AL D I+ PL ++  + 
Sbjct: 58  TEPTLILAVRPQEHHLLATDADEAELVCATLQFDGGANNPLTLALPDFIIKPLGELQGLD 117

Query: 118 GTLDWLFDEAFAEHCSREAVMNRLFELMVIQFLRHMMAYHSMTTGMMSGLADLRLARAMT 177
           GTLDWLF+EAF + C R+ ++NRLFELM+IQ LRH++A  S+ +GMM+GLA+ +L+RA+ 
Sbjct: 118 GTLDWLFEEAFGDECGRDVILNRLFELMIIQLLRHLIASRSIASGMMAGLANAQLSRALV 177

Query: 178 LLHNNPERPWTVQEMAVESNMSRASFAAHFHKVVGQTPADYVLSWRVSLAQKRLREGRPI 237
            +H+ P+R W+V E+A  S MSRASFA+HF ++VG TPADY+ +WR+SL QKRLREGRPI
Sbjct: 178 GIHDEPQRNWSVAELANLSGMSRASFASHFREIVGITPADYLANWRISLTQKRLREGRPI 237

Query: 238 ALIADEVGYESPSALARAFRRKIGTSPREWLQ 269
           ALIADEVGYESPSALAR FRRK+G SP++WLQ
Sbjct: 238 ALIADEVGYESPSALARTFRRKVGASPKQWLQ 269