Pairwise Alignments

Query, 232 a.a., nickel permease from Pseudomonas simiae WCS417

Subject, 276 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

 Score =  127 bits (319), Expect = 2e-34
 Identities = 74/225 (32%), Positives = 123/225 (54%), Gaps = 6/225 (2%)

Query: 3   DWISY--YAGLIAKGLQTTLSLLVISALLGFALAVLVALARLSRRKWLARGAQAYTSVLR 60
           DW  +  Y      GL TT++L+  S +LG  L+V +A AR+S  + +   A AY  V R
Sbjct: 51  DWDKFQRYGPRYIDGLITTITLVGSSIILGAILSVPIAFARMSENRIIGAFAYAYVYVFR 110

Query: 61  GTPLLIQIYIFYYGLGSLFAQFPMIRGSFLWPYLRDGYWYIVFALVLSVGAYVGEVIRGG 120
            TPLL Q+++ YYGLGS     P +    LW + R+ ++  + +L L+  AY  E++RG 
Sbjct: 111 STPLLAQLFLIYYGLGSFR---PALEAVDLWWFFREAWYCGLLSLTLNTAAYQAEILRGA 167

Query: 121 LLAVPKGEMEAASAFGMTPRQALLRVRLPRAMRLLLPTLAGETVMLLKSTALASTIAVVD 180
           + +VP+G+ E A++ G++      +V LP+A+ + L     E ++++K +A+ S + V D
Sbjct: 168 IRSVPRGQHEGAASLGISKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFD 227

Query: 181 LLGAANVVRAQTLQIYQPLLLVAAVYLCLTFLIEGVYAIAERRGT 225
           L+G      ++T   YQ  L  A  YL +   +  ++A  E R T
Sbjct: 228 LMGQTRYAFSRTFD-YQAYLWAAIFYLTIVETLRHIWAWLEARLT 271