Pairwise Alignments

Query, 438 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  228 bits (582), Expect = 2e-64
 Identities = 157/455 (34%), Positives = 231/455 (50%), Gaps = 51/455 (11%)

Query: 9   IALGILSASTAMANDQDQSKGFIEDSHLNIAARNAYISRDYKN-GKQDKAEWGQGFIGKL 67
           +A+       A A D   + GF+E +HLNI  RN Y++RD ++    D  EWGQGF+G  
Sbjct: 12  LAIAATIVPLAHAADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDDSKEWGQGFLGIF 71

Query: 68  ESGFTQGTVGVGVDVIGQYAIRLDGGKGRAGAGGIDFFKQGNGTTNPDGSNNPGSAPHDL 127
           ESG+TQGTVG G+D      ++LDGG G  G+  +           P GS N G AP   
Sbjct: 72  ESGYTQGTVGFGLDAHAMLGLKLDGGGGTDGSSIL-----------PYGSGN-GKAPGSF 119

Query: 128 AKGGAAVKFRVSNTVLKYGDQFPAVPVLQYDNSRLLSETYTGTSIVSKEIAGLQLDAGH- 186
           +  G  +K R  +T LK GD F   PV+    +R+L +T+ G S+ +  + G   + G  
Sbjct: 120 STAGGTLKMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQA 179

Query: 187 -FTKEARKSME---GTDSGRL------KSIDYIGGSYKFTESLSAALYASDMQDVLKKQY 236
            FTK   +S     GT  G L      + +++ G S+   + L++ LYA++++DV  + Y
Sbjct: 180 SFTKLYNQSGHRRIGTSYGALPEHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYY 239

Query: 237 VNVNYVLALPEKQSLTFDFNGYKTKLDRSFALENQKDADARDNKIWSLGATWAVGPHSFT 296
            +++Y   + E  SL    + Y T+      L +       DN  +SL  T  VG HS T
Sbjct: 240 YDLDYTYVVNEMISLNPGLHYYHTQDTGQSLLGD------IDNNTYSLHFTVDVGHHSVT 293

Query: 297 VAHQRSTGDTGYLYGGYRNAGGIGDGGNTILLANSYWSDFNGKDERSWQLGYGIDFATFG 356
            A+QR  G+T + Y        I  G +  L  +  +SDFNG +ERSW+L Y  +F   G
Sbjct: 294 AAYQRVNGNTPFDY--------IAQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLG 345

Query: 357 VPGLTYNVAYVRG----TNIDDGTN------RGDGTEREIWNQ---FKYVVQSGPAKDLS 403
           +PGLT  V+Y+ G    T +D  +         DG + + W +    KYVVQ G AKDL+
Sbjct: 346 LPGLTSAVSYISGKTDLTKVDPQSRGYSAWYSADGKDAKHWERDIDLKYVVQGGKAKDLA 405

Query: 404 LRARASWLRVSNNADQYNVGGNEIRLFADYPINVF 438
           +R + +  R SN     +   +E R+  DYPINVF
Sbjct: 406 VRLQWATNRGSNGYSAVDRDVDEYRVIVDYPINVF 440