Pairwise Alignments

Query, 284 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  138 bits (347), Expect = 1e-37
 Identities = 88/250 (35%), Positives = 132/250 (52%), Gaps = 4/250 (1%)

Query: 10  LGSAVLMLAAGFSWAAEKPIVFAVAAEPYPPFTVKGGNGQWSGFEVDLIHKLCEGMKAEC 69
           LG+  L + +  S AAEKP+   + A  YPPF  K  +G  +GF+ D+ + LCE MK +C
Sbjct: 7   LGALALSVFSLVSQAAEKPLKIGIEAA-YPPFAFKQPDGSIAGFDYDIGNALCEEMKTKC 65

Query: 70  QIKEVAWDGIIPSLLAKKIDVIFSSMSVTDEREKQIAFSRAYYDSLLGVAGPKGSEVEIS 129
              E  +DG+IP+L  +KID I SSMS+TD+R+K + F++ YY +   +    G+ V  S
Sbjct: 66  TWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGTTVSDS 125

Query: 130 PAGLKGKLIGVQISTVSANYLKKYY-ENIADLKYYDTQESANADLIAGRIDYMMADDTAI 188
              LKGK IGVQ  ++   + K+      A +  Y TQ     D+ AGR+D  +AD T +
Sbjct: 126 LDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVADATLL 185

Query: 189 A-MMVKTPEASGLAHIASVPYD-PIIGRGVGAGLRKEDTALKARLDKAIGELLVSKDYDD 246
               +KT    G A +     D    G G+G  +RK D A   R++ AI  +  +  Y +
Sbjct: 186 EDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRANGKYKE 245

Query: 247 LSQHYFGLSV 256
           +   YF   +
Sbjct: 246 IESKYFNFDI 255