Pairwise Alignments

Query, 985 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 233 a.a., YapH protein from Variovorax sp. SCN45

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 6/84 (7%)

Query: 449 GSLIKSGAGTLVLSGDSTYRGATTVNGGLLAVNGSLTSAVTVNDSGTLGGSGRIAALSVH 508
           GSL  +GAGTL L+G +T+ G TTV  G LAVNGSL S   VN   TL G+G +  ++++
Sbjct: 155 GSLNFNGAGTLTLTGANTFGGGTTVQSGTLAVNGSLLSPTVVNAGATLTGTGTLGNVTLN 214

Query: 509 PGGRVAPGNSVGTLQVAGDVNLGA 532
               V    SVG    AG + +G+
Sbjct: 215 ---GVLNAGSVG---AAGTLTMGS 232



 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 21/146 (14%)

Query: 435 GTARDQAAATRIYEGSLIKSGAGTLVLSGDSTYRGATTVNGGLLAVNGSLTSAVTVNDSG 494
           GT   Q + T    G L+K+  GTLVL+G + + G   +N G L                
Sbjct: 56  GTISAQISGT----GGLVKNDTGTLVLAGANNFSGGVDLNAGNL---------------- 95

Query: 495 TLGGSGRIAALSVHPGGRVAPGNSVGTLQVAGDVNLGAGSTYAV-ELTPIDSDRIVAGGR 553
            LG +G +   S+   G      +V  L +   +NLGAG++  +     +    I+ G  
Sbjct: 96  VLGNAGALGTGSLDVLGNAGLSANVAGLNLGNAINLGAGASLGIGGGNDLSVSGIIGGAG 155

Query: 554 AILGGGNVTLALENSPTLLSGAQAQS 579
           ++   G  TL L  + T   G   QS
Sbjct: 156 SLNFNGAGTLTLTGANTFGGGTTVQS 181



 Score = 32.7 bits (73), Expect = 3e-05
 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 14/155 (9%)

Query: 450 SLIKSGAGTLVLSGDSTYRGATTVNGGLLAVNGSLTSAVTVNDSGTL-----GGSGRIAA 504
           ++ +  AG + + G   + G    + G   + G L   +T + + T+     G +G I+A
Sbjct: 2   AVFQGTAGVVTVVGPVAFGGLQFASNGYQIIGG-LGGTLTTDTASTIIRVDAGMTGTISA 60

Query: 505 LSVHPGGRVAPGNSVGTLQVAG------DVNLGAGSTYAVELTPIDSDRIVAGGRAILGG 558
                GG V   N  GTL +AG       V+L AG+        + +  +   G A L  
Sbjct: 61  QISGTGGLVK--NDTGTLVLAGANNFSGGVDLNAGNLVLGNAGALGTGSLDVLGNAGLSA 118

Query: 559 GNVTLALENSPTLLSGAQAQSLIGRQYTILQAVGG 593
               L L N+  L +GA      G   ++   +GG
Sbjct: 119 NVAGLNLGNAINLGAGASLGIGGGNDLSVSGIIGG 153



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 434 VGTARDQAAATRIYEGSLIKSGAGTLVLSGDSTYRGATTVNGGLLAVNGSLTSAVTVNDS 493
           +G A   A    +  G+ I  GAG  +  G       + + GG  ++N +    +T+  +
Sbjct: 111 LGNAGLSANVAGLNLGNAINLGAGASLGIGGGNDLSVSGIIGGAGSLNFNGAGTLTLTGA 170

Query: 494 GTLGG-----SGRIAA-------LSVHPGGRVAPGNSVGTLQVAGDVNLGA 532
            T GG     SG +A          V+ G  +    ++G + + G +N G+
Sbjct: 171 NTFGGGTTVQSGTLAVNGSLLSPTVVNAGATLTGTGTLGNVTLNGVLNAGS 221