Pairwise Alignments

Query, 454 a.a., amino acid permease from Pseudomonas simiae WCS417

Subject, 443 a.a., Amino acid permease family protein from Pseudomonas putida KT2440

 Score = 77.0 bits (188), Expect = 1e-18
 Identities = 100/430 (23%), Positives = 175/430 (40%), Gaps = 43/430 (10%)

Query: 6   TPDGVLKPTLSVFDVVAITVSAVTPASSVFVIAPFAIQQAGSGVFLAFVMAGLLALMFAF 65
           T    L+ +L  F V+   ++ + P   VF       Q +G+   +A+++A    +  A 
Sbjct: 5   TSGASLRRSLGPFSVLLFGLAFLAPLI-VFGTYGVITQASGNTTAMAYLVAATGVVFTAL 63

Query: 66  CYAELGRAHNSAGGEYVYATRVFGGMAGYATFLTVLVMLLFIPPVLATGAATYLNNALGT 125
            Y  L R    AG  Y Y  ++     G+      L+   FIP ++    A+YLN A   
Sbjct: 64  SYGRLVRVFPVAGSAYTYTRKMLNANLGFMVGWAALLDYFFIPMLIWLLGASYLNMAF-P 122

Query: 126 KFDSQTVALVIVVCSYALGILNIKLNAWITGTCLLLEVAALLVIVVIGFGNPVQ------ 179
           +          +V +  L +L I+    +     +L +   LVI+ +  G  V       
Sbjct: 123 EVPQWVWITGFIVSTSLLNVLGIQ----VANRFNVLLMVVQLVIIAVFIGLCVHYIVAAN 178

Query: 180 -PASVLFQPQIVENGVLHLAPWALVIGAVGIGLFSYNGYGPAVLLAEDMKCGGKGVHKAV 238
            P  +L         V    P+A  +    I  +S+ G+     L+E+ +  G+ + +A+
Sbjct: 179 GPGGLLSAKPFFNQDV----PFATSMAGAAIAAYSFLGFDALSTLSEETRDPGRTLPRAI 234

Query: 239 LWSLGLVVIIELVPITALLIGAPSLSEMISSPDPIGYLLTSH--------GNETLSRLVS 290
           L    LV +I      ++ +G+ S    ++ P P   L+           G +    +V 
Sbjct: 235 L----LVALIG----GSVYVGS-SYFMYLAHPSPTFELVDGAAFEIARMIGGDLFFAVVL 285

Query: 291 AGIFLSVFNAIVAIVIQIGRVVFSSGRDALWTPSINKLFTRIHPRWDSPWLATLFLAIPS 350
            GI ++ F A ++    +GR++++ GRD        +LF  +HPR+ +P    L   +  
Sbjct: 286 TGIIVAHFAAGMSFQASVGRLLYALGRD---NQLPRRLFGALHPRYKTPAFNILLCGV-F 341

Query: 351 ALLSFSSNLADLTSFSVLLIMLVYLVVALSALMSR--VLLRDREHPYRMPLWPLPALVAV 408
               F   +A  TS       L +  V L AL       ++D     R  L+PL  LV  
Sbjct: 342 GTAGFGLTIATATSLVNFGAFLAFTAVNLCALRLTFDARVKDGAGLLRGVLFPLIGLVT- 400

Query: 409 LGAGYLLVTL 418
             AG++LV+L
Sbjct: 401 --AGWMLVSL 408