Pairwise Alignments

Query, 815 a.a., helicase UvrD from Pseudomonas simiae WCS417

Subject, 823 a.a., putative helicase, UvrD/REP family from Pseudomonas putida KT2440

 Score = 1129 bits (2919), Expect = 0.0
 Identities = 555/821 (67%), Positives = 660/821 (80%), Gaps = 7/821 (0%)

Query: 1   MSQQKPDLPPELRPLAEMPLFKRLAARLFGHGLTRLRAQHRFSWLHGQADGFRSGHEAGV 60
           M+ ++P  P +L P A++P F+RLAARL G GLTRL+AQHR SW  G A G R+GH  GV
Sbjct: 1   MAHEQPLAPADLTPPAQLPWFRRLAARLLGRGLTRLQAQHRDSWFLGHATGQRTGHADGV 60

Query: 61  EYGYREGKAEGIEEGRQVLLIRDFRPDEHRAPGVDDSLFDDWRLPLTAELKKRMKADVAR 120
             G+  G+ EG E GRQVL+IRD RPD    PG DD+LFDDWRLPLTAELKKR KADVA+
Sbjct: 61  REGFERGRVEGFEAGRQVLVIRDTRPDSAAVPGQDDNLFDDWRLPLTAELKKRFKADVAQ 120

Query: 121 LLPAHAQPSAAQWKMIFSETPSTSVIAGAGAGKSTSLVLRILLLTHYLGFELSSMTVVTF 180
            LPA AQPSAAQWK+IFS+TPST V+AGAGAGKSTSLVLRILLL HYLG+EL +MTVVTF
Sbjct: 121 RLPAEAQPSAAQWKLIFSDTPSTCVVAGAGAGKSTSLVLRILLLRHYLGYELDAMTVVTF 180

Query: 181 TRESRKDFINKLMEILNLWGQPLGVKEAQAVVRTFHSRILPMVRSLPGFERLQAFENLN- 239
           TRESRKDFI +L+++  LW   L   +A+ +VRTFHSRILP+VRSLPGF +++AFE L  
Sbjct: 181 TRESRKDFIKRLLQVFALWQINLQPVQARELVRTFHSRILPLVRSLPGFGQVRAFETLGH 240

Query: 240 ---SGFE-DADSNPFDLRINEAQRQQMNACYHRLHREHPRFRELIAPLARHGLQLKALER 295
              +G E +ADSNPFDLR+N+AQRQQ+N CY  L  E PRF EL+  L    LQLK L+ 
Sbjct: 241 EMPAGREAEADSNPFDLRLNDAQRQQLNQCYSSLLGESPRFAELVGQLRSEALQLKPLDP 300

Query: 296 DHPDVQKRVAVTELAAKRDEELCDVIEDLWFRAGAWPIKGIEPNRQTIEINGAQFHCHGY 355
           ++PDVQKR  VT+LAA+RDEELCDVIEDLWF AG WPIKGIEP R+T++I G++FH HG 
Sbjct: 301 NNPDVQKRAQVTQLAAQRDEELCDVIEDLWFAAGVWPIKGIEPCRETVDIRGSRFHVHGR 360

Query: 356 IPELDAWVVLGFDSRENPQTSRPHSKLSVRAEWAVKRTLFQAFCHKPLIWLDSYESSRRL 415
           +      VVLGFD  ++ Q  RP +KL+VRAEWAVKRTL QAFC +PLIWLD+Y  +RRL
Sbjct: 361 LEGQGPLVVLGFDPAQSAQYQRPGAKLTVRAEWAVKRTLLQAFCDRPLIWLDNYAMARRL 420

Query: 416 LSSVAGDAMAGPGFDYKVKGELASAPLLDSFVAAAGFIENLGLDVPTAVGQMSFAKDDPD 475
            +S+AGDA+AGPGF+YKVKGELA APLLD+FV+AA FIENLGL+V  AV  MSF   D D
Sbjct: 421 AASLAGDAVAGPGFEYKVKGELAPAPLLDAFVSAANFIENLGLEVNNAVAAMSFPSGDSD 480

Query: 476 RFFFEALSIFWKALEDHLLDQSPPIMTYNRMFSLFGENTPENLKLLSDPLLRPLSHLMID 535
             FFEAL+++WKALE HLLDQSPP+M+YNRMF+LFGEN PENL LL DPLLRPL+HLMID
Sbjct: 481 ALFFEALALYWKALEAHLLDQSPPVMSYNRMFALFGENNPENLHLLPDPLLRPLAHLMID 540

Query: 536 EFQDVSPQIVSWIRASLREIRSRGPAIHIGRGAQRSSLLCVGDDWQSIYGWRGSSPKYFM 595
           EFQDVSPQIVSW+RA L EIR RGPA+H GR AQ SSLLCVGDDWQSIYGWRGSSPKYFM
Sbjct: 541 EFQDVSPQIVSWLRACLAEIRRRGPAMHTGRHAQHSSLLCVGDDWQSIYGWRGSSPKYFM 600

Query: 596 AFDKEFPSPSTTRVMLGENYRSHQHIIDAAEHIVRAAPAIPGKKAKASGAPQAL--VPVK 653
            F K FPSP+ TRVML +NYR  Q +IDAAEH+V+  PAI GKKA+ASG    L   PVK
Sbjct: 601 EFTKAFPSPANTRVMLVDNYRCQQQVIDAAEHLVKGTPAIAGKKARASGPAAELPGSPVK 660

Query: 654 VLERDDAALGRQLSEHYQKGDSILMLYRKSSDKSLIEEHISSVVNVDSSLPPQARRLKQL 713
           V +RD+AALG  L EHYQ+G++++MLYRK SD++L+ EH+ SV++ +++LP + RRL+QL
Sbjct: 661 VFDRDEAALGETLVEHYQRGETVMMLYRKGSDRALMNEHLQSVLHAEAALPAEQRRLRQL 720

Query: 714 TYHSAKGLQADAVFMLGDCQHVTSSPYKNQVYRMAGLGNAGDSEPYDNAQKDEVLRLAYV 773
           TYHSAKGLQADAVFMLGDCQ++TSSPYKNQVYR AGLG AGD++P+D AQK+EV RLAYV
Sbjct: 721 TYHSAKGLQADAVFMLGDCQYLTSSPYKNQVYRQAGLGKAGDAQPFDTAQKEEVQRLAYV 780

Query: 774 GITRAVSHCYWYVEKPEGQAVNVPKASERVDGKKAFFDDQR 814
            +TRAV HCYW+VE   G A   P+AS  VDGK+AFF+D R
Sbjct: 781 AVTRAVQHCYWHVEAANGDAAAAPRASSHVDGKQAFFEDLR 821