Pairwise Alignments

Query, 815 a.a., helicase UvrD from Pseudomonas simiae WCS417

Subject, 685 a.a., DNA helicase IV from Dickeya dianthicola ME23

 Score = 69.7 bits (169), Expect = 5e-16
 Identities = 72/259 (27%), Positives = 109/259 (42%), Gaps = 32/259 (12%)

Query: 528 PLSHLMIDEFQDVSPQIVSWIRASLREIRSRGPAIHIGRGAQRSSLLCVGDDWQSIYGWR 587
           P  H+++DEFQD+SPQ    + A  R+I               SSL  VGDDWQ+IY + 
Sbjct: 430 PWRHILVDEFQDISPQRARLLDALRRQIPD-------------SSLFAVGDDWQAIYRFS 476

Query: 588 GSSPKYFMAFDKEFPSPSTTRVMLGENYRSHQHIIDAAEHIVRAAPAIPGKKAKASGAPQ 647
           G+       F++ F   +  + +L   YR +  I D A   ++  PA   K   +     
Sbjct: 477 GAELTLTTTFERHFGEGA--QCVLDTIYRFNHRIGDIASRFIQQNPAQLKKALNSLRDGN 534

Query: 648 ALVPVKVLERDDAALGRQLSEHYQKGDSILMLYRKSSDKSLIEEHISSVVNVDSSLPPQA 707
               V + +    AL  ++S +      IL+L R          H+       +      
Sbjct: 535 KKSVVLLAQEQLEALLDKMSGYVTTQARILVLAR--------YHHLRPDALEKAQTRWPH 586

Query: 708 RRLKQLTYHSAKGLQADAVFMLG--DCQHVTSSPYKNQVYRMAGLGNAGDSEPYDNAQKD 765
             L  +T H++KG QAD V +LG  + +    +P +  V     L      EP+ +A   
Sbjct: 587 LHLDFMTIHASKGQQADYVIVLGLHEGRDGFPAPPRESVLEAVLL---PQPEPFPDA--- 640

Query: 766 EVLRLAYVGITRAVSHCYW 784
           E  RL YV +TRA  H  W
Sbjct: 641 EERRLLYVALTRA-KHQVW 658



 Score = 36.6 bits (83), Expect = 5e-06
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 13/107 (12%)

Query: 131 AQWKMIFSETPSTSVIAGAGAGKSTSLVLRILLLTHYLGFELSSMTVVTFTRESRKDFIN 190
           +Q + + +   +  V+AGAG+GK++ LV R   L H        + ++ F R++  +  +
Sbjct: 200 SQCQAVVNGENAVLVLAGAGSGKTSVLVARAAWLLHRAEASAQQILLLAFGRQAADEMNS 259

Query: 191 KLMEILNLWGQPLGVKEAQAVVRTFHSRILPMV----RSLPGFERLQ 233
           ++ E L+         E QA  +TFH+  L ++    R  P   RL+
Sbjct: 260 RIRERLH-------TDEVQA--KTFHALALHIIQQCSRKAPVISRLE 297