Pairwise Alignments

Query, 313 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  203 bits (516), Expect = 5e-57
 Identities = 112/288 (38%), Positives = 169/288 (58%), Gaps = 2/288 (0%)

Query: 8   STARMVQLMGQLASLEGYNLSPLDDVRFLRSNRPLKRTPVLYEPGIVILCQGQKRGYLGD 67
           + A +  L+  L +  G+  + L  V+ L  +  +  +P +YEP ++I+ QG K   LG 
Sbjct: 9   ANAPLCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGP 68

Query: 68  DIYIYDAQHYLVVSVPVPFTMETDASEAEPMLAVYIRLDFNLAGELIQQVDEVWN--IRA 125
               Y A HYLV ++ VPF  ET A+   P+L V + +D  + GEL+Q +    +  ++A
Sbjct: 69  RTLEYGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQA 128

Query: 126 AQPMGMYASPMDEPLRQSTLRFLEVMGDCTDAQILGPAMLRELYYRILTGEQGGTLRAAI 185
             P  M ++ +D P+R+S  R L  + D  DA++LGPA +RE+ Y  L G Q G LRA +
Sbjct: 129 QTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALV 188

Query: 186 AQQGQFGKVTRAIHKIHRCYHERLDVEILAQEAQMSVPNFHLHFRKVTDSSPMQYLKSTR 245
            QQG F ++  A+  +   Y E L VE LA  A MSV  FH HF++ TD +PMQYLK  R
Sbjct: 189 EQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLR 248

Query: 246 LHQARLLMLRNDLTAAKSAFLVGYESASQFSRDFKRLFGRTPIAEVAW 293
           L +A+ +++   L  A++A  VGY+S SQFSR++KR F R+P  E+ +
Sbjct: 249 LLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDELPY 296