Pairwise Alignments

Query, 577 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 597 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  436 bits (1120), Expect = e-126
 Identities = 238/573 (41%), Positives = 343/573 (59%)

Query: 5   LDTLKRPVNRLIRLGVAFAALGALVNLVPFIGLTELGRLLLAGSADSQTLWLWAALVVIA 64
           L  +  P+   + L    AA G+++ LVP  G+  +  L L+ +A S  +    A  + +
Sbjct: 22  LSRVLSPIRGRLALSAVLAAAGSMLALVPLAGIAHIAHLALSETATSGAIGRAIAASIAS 81

Query: 65  LSVGWMASGVALWLTHVADHRLQSSLREAMVHKLGRVPLGWYTDTTSGAVRKVVQDDLED 124
           L  G      A  L H AD+ +   LR A+  +L +VPLGW+++  S  V++ +QDD+  
Sbjct: 82  LFTGMTLITAAEMLAHQADNHITHHLRVAIGQRLMQVPLGWFSERASSEVKRAMQDDIGT 141

Query: 125 LHHLVAHHAVELTAAIVTPLAGLLWLATLNWRLALLAVLTLPIYAVAYTLMMRGFGAKMQ 184
           LH L AH    L   +   L  + +L  ++WRLA++ +L  P + +     ++   A M 
Sbjct: 142 LHSLTAHFFTTLGRTVGAVLISVAYLFAMDWRLAVVVLLPFPAFFLFLHRAIKASAAHMG 201

Query: 185 LLDKSMTRVSAAIVEFVHGIAVVKAFGQVGQAHRSYQQAVNQFSEQYAGWVRPLLRLEAF 244
            +   M R+  A+VEFV+G+ +VKAFG  G A   Y+ AV+ F+  + G+ RPL+   A 
Sbjct: 202 DVVAGMARIDNAVVEFVNGMPLVKAFGGRGNAQDRYRAAVDAFANTFTGFTRPLVAAMAR 261

Query: 245 SSMALSVPVILLVSLGVGSLLLAYGWITPLELFAETLVAVVIPQSLLVINQSLTAQRTAL 304
           ++  ++   ++ V L  G   +A GWI PL++    LVA  +   L +++        A+
Sbjct: 262 ANALIAPVTVVGVVLLAGMAFVALGWIEPLQILPFALVAPGLCAPLQLLHYITHDLNNAV 321

Query: 305 AAADRIEALLDVEELPTPKACVQPQGSDIRFEQVQFGYDAEHLILKGVDLHCPAGSVTAL 364
            AA R++ LLD   LP P     P GS++R EQ+   Y   + +L  V      G+ TA+
Sbjct: 322 GAAQRVQVLLDTPVLPAPAVGSLPNGSELRVEQLSHAYAPGNNVLDDVSFTLAPGTTTAI 381

Query: 365 VGASGAGKSTLAKLVPRFHDVNAGRICVGGADVREIDPRQLYRHVGFVLQDAQLVHGTVA 424
           VG SGAGKSTLA+L+ RF D +AGRI +GG D+R+I+ R+LYR +GFVLQ+ +L+H +VA
Sbjct: 382 VGPSGAGKSTLARLLLRFFDPDAGRITLGGVDLRQIESRELYRRIGFVLQEVRLIHASVA 441

Query: 425 DNLRLGRPDASDAEVVAAARSAQIHARIQALPRGYQSVIGDDAVFSGGEAQRVSIARTLL 484
           DN+ LG+P A+  +V AAAR A IH RI  LPRGY SV+G+DA  SGGE QR+SIAR +L
Sbjct: 442 DNIALGKPAATREQVEAAARLANIHTRILQLPRGYDSVVGEDAQLSGGEQQRLSIARAVL 501

Query: 485 ADTPVLILDEATSHADPESEALIQDALSALARGRTVLVIAHRLASISGVDQIVVLDQGRV 544
            D PVL+LDEAT+ AD ESEA IQDALS  ARGRT+LVIAHRL ++   DQI+VLDQG +
Sbjct: 502 LDPPVLVLDEATAAADAESEAAIQDALSRFARGRTLLVIAHRLDTVMHADQILVLDQGAL 561

Query: 545 LESGCHEQLLKANGAYARMWRAGAETPALEMSL 577
            E G H +LL   G YAR+W  G     ++ +L
Sbjct: 562 CEQGRHSELLNRQGLYARLWAQGGYQDTVKKAL 594