Pairwise Alignments

Query, 577 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 587 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  244 bits (624), Expect = 5e-69
 Identities = 183/569 (32%), Positives = 285/569 (50%), Gaps = 25/569 (4%)

Query: 10  RPVNRLIRLGVAFAALGALVNLVPFIG---LTELGRLLLAGSADSQTLWLWAALVVIALS 66
           RP  R + L +    + A + L    G   L + G +  +    +QT+ L+  L+V+AL+
Sbjct: 21  RPYRRQVLLALLALVVTAAITLSMGQGIRLLVDQGFMTRSAHQLNQTIGLFL-LLVLALA 79

Query: 67  VGWMASGVALWLTHVADHRLQSSLREAMVHKLGRVPLGWYTDTTSGAVRKVVQDDLEDLH 126
           VG  +     +L      R  + +R A+   L  +  G++ D  S  ++  +  D   L 
Sbjct: 80  VGTFSR---FYLVSWIGERCVADIRRAVFDHLIGLHPGFFEDNRSSEIQSRLTADTTLLQ 136

Query: 127 HLVAHHAVELTAAIVTPLAGLLWLATLNWRLALLAVLTLPIYAVAYTLMMRGFGAKMQLL 186
            ++           +  + G++ L   N +L  + V+TLP+      L  R   +  +  
Sbjct: 137 SVIGSSLSMFLRNALMVIGGVVLLFITNPKLTSIVVVTLPLVLAPILLFGRRVRSLSRQS 196

Query: 187 DKSMTRVSAAIVEFVHGIAVVKAFGQVGQAHRSYQQAVNQFSEQYAGWVRPLLRLEAFSS 246
              +  V + + E +  I  V+A+         +   V       A +     R+   + 
Sbjct: 197 QDRVADVGSYVAETLGQIKTVQAYNHQAHDRELFADTVE------AAFTVARKRITQRAW 250

Query: 247 MALSVPVILLVSLGV----GSLLLAYGWITPLELFAETLVAVVIPQSLLVINQSLTAQRT 302
           +   V V++L ++GV    G + +  G I+  EL A    ++++  +   +++ +   + 
Sbjct: 251 LITLVIVLVLGAVGVMLWVGGMDVIAGRISAGELAAFVFYSLIVGSAFGTLSEVIGELQR 310

Query: 303 ALAAADRIEALLDVEE--LPTPKACVQPQ---GSDIRFEQVQFGYDAEHLI--LKGVDLH 355
           A  AA+RI  LL      LP   A V PQ      I  +QV F Y +   +  + G+ L 
Sbjct: 311 AAGAAERIAELLAARSAILPPDVAQVLPQPRASGHIELQQVVFAYPSRPTVAAVDGLSLT 370

Query: 356 CPAGSVTALVGASGAGKSTLAKLVPRFHDVNAGRICVGGADVREIDPRQLYRHVGFVLQD 415
              G   ALVG SGAGKSTL  L+ RF+D   GRI + G  V + DP QL R    V Q+
Sbjct: 371 IEPGQTVALVGPSGAGKSTLFDLLLRFYDPQQGRILLDGQPVTDFDPDQLRRQFALVAQN 430

Query: 416 AQLVHGTVADNLRLGRPDASDAEVVAAARSAQIHARIQALPRGYQSVIGDDAV-FSGGEA 474
             L  GTV  N+R GRP+A+ AEV AAAR A     I+ LP+GYQ+ +G+  +  SGG+ 
Sbjct: 431 PSLFRGTVEANIRYGRPEATLAEVEAAARGAHADEFIRQLPQGYQTPLGEGGIGLSGGQR 490

Query: 475 QRVSIARTLLADTPVLILDEATSHADPESEALIQDALSALARGRTVLVIAHRLASISGVD 534
           QR++IAR LL D P+L+LDEATS  D +SE LIQ AL +L  GRT LVIAHRLA++   +
Sbjct: 491 QRLAIARALLVDAPILLLDEATSALDAQSEYLIQQALPSLMAGRTTLVIAHRLATVQHAE 550

Query: 535 QIVVLDQGRVLESGCHEQLLKANGAYARM 563
           +I V+DQGR++  G H QL++ +  YAR+
Sbjct: 551 RIAVIDQGRLVAVGTHRQLIEDSPLYARL 579