Pairwise Alignments

Query, 581 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  234 bits (596), Expect = 1e-65
 Identities = 169/509 (33%), Positives = 255/509 (50%), Gaps = 12/509 (2%)

Query: 61  AAMVVLTCIAHYQ---QAMQGFALALLVLTTLHD---RLGQHLVSLPLGWFNSEKVGRLS 114
           A  +++  IA +Q     +  + LA + L+ +HD    L   L+ LP  +F++   G L 
Sbjct: 81  AVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLI 140

Query: 115 RSATSGTLMVTGLFAHYLGPVV-SGVVVPATVALTLFVFDWRLGLTAVLCAPLIYFAHHW 173
              T    MVTG     +  V+  G+ V    A  L++ +W L L  V   P+I      
Sbjct: 141 SRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWM-NWHLTLVMVAILPVIAVMVSI 199

Query: 174 SAAAIGSNDARVEAAATLAGNRVVEFARYQQVLRAFGRTQDGYAPLQAANQAQKQAGGSM 233
           ++        +++ A     +   E  +  +V+R+FG   + Y   +    +Q      +
Sbjct: 200 ASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGG--EAYEQQRFGQASQSNTDKQL 257

Query: 234 LSQTFPKLLAGGLTVQLAFALLVGVGITLAAHGEIDAIQLVALLALAARFVGPLAEAAAR 293
                  L    L + +  A+   + + L   G+  A  LVA +  A     P+ + +  
Sbjct: 258 RMTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGDSTAGDLVAYITAAGLLPKPIRQLSEV 317

Query: 294 SGLLRMAGNDLDQLVGILREPSLPEPVVSQPLSAPGSLAFEQVSFAYPSGPT-VLQDLTF 352
           S  ++      + +   L E    +    +     G L    +SF YP     VL D++F
Sbjct: 318 SSTIQKGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVRNLSFTYPGTEREVLSDISF 377

Query: 353 SAPAHSMTAIVGASGSGKTTVTRLLMRFFDTTTGSVKVGGVDVREQSSEALMAQLSLVMQ 412
            A    M A+VG SGSGK+T+  L+ RF+    G + + GV++       L   +S V Q
Sbjct: 378 VAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQ 437

Query: 413 DVYLFDDSLEANIRVGSPDASAR-DVAEAARLAGVDEIVARLPQGWNTPVGEGGASLSGG 471
            V LF+D++  NI  G    + R D+  AA  A   E V RLP+G++T VGE G  LSGG
Sbjct: 438 HVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGG 497

Query: 472 ERQRVSLARALLKRAPIVLLDEATAALDPHNEAFVQAAIQRLMQNSTVLVIAHRLPTIMA 531
           +RQR+++ARALLK AP+++LDEAT+ALD  +E  +QAA+  +MQ  T LVIAHRL TI  
Sbjct: 498 QRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEK 557

Query: 532 ADQILVLDQGRLVESGTHAQLLSLNGRYA 560
           ADQILV+DQGRLVE GTH +LL+ NG YA
Sbjct: 558 ADQILVMDQGRLVERGTHTELLAANGHYA 586