Pairwise Alignments

Query, 581 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 597 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  279 bits (713), Expect = 3e-79
 Identities = 201/564 (35%), Positives = 285/564 (50%), Gaps = 39/564 (6%)

Query: 24  LVTSAVLQGLAVAL-LVPILHALFVGDLPSAMTWLAGLAAMVVLTCIAHYQQAMQGFALA 82
           L  SAVL      L LVP+     +  L  + T  +G     +   IA     M     A
Sbjct: 33  LALSAVLAAAGSMLALVPLAGIAHIAHLALSETATSGAIGRAIAASIASLFTGMTLITAA 92

Query: 83  LLVL------TTLHDR--LGQHLVSLPLGWFNSEKVGRLSRSATSGTLMVTGLFAHY--- 131
            ++        T H R  +GQ L+ +PLGWF+      + R+       +  L AH+   
Sbjct: 93  EMLAHQADNHITHHLRVAIGQRLMQVPLGWFSERASSEVKRAMQDDIGTLHSLTAHFFTT 152

Query: 132 LGPVVSGVVVPATVALTLFVFDWRLGLTAVLCAPLIYFAHHWSAAAIGSNDARVEAAATL 191
           LG  V  V++       LF  DWRL +  +L  P  +   H +  A  ++   V A    
Sbjct: 153 LGRTVGAVLISVAY---LFAMDWRLAVVVLLPFPAFFLFLHRAIKASAAHMGDVVAGMAR 209

Query: 192 AGNRVVEFARYQQVLRAFGRTQDGYAPLQAANQAQKQAGGSMLSQTFPKLLA-GGLTVQL 250
             N VVEF     +++AFG   +     +AA  A      +    T P + A       +
Sbjct: 210 IDNAVVEFVNGMPLVKAFGGRGNAQDRYRAAVDA---FANTFTGFTRPLVAAMARANALI 266

Query: 251 AFALLVGV----GITLAAHGEIDAIQLVALLALAARFVGPLAEAAARSGLLRMAGNDLDQ 306
           A   +VGV    G+   A G I+ +Q++    +A     PL        LL    +DL+ 
Sbjct: 267 APVTVVGVVLLAGMAFVALGWIEPLQILPFALVAPGLCAPLQ-------LLHYITHDLNN 319

Query: 307 LVG-------ILREPSLPEPVVSQPLSAPGSLAFEQVSFAYPSGPTVLQDLTFSAPAHSM 359
            VG       +L  P LP P V   L     L  EQ+S AY  G  VL D++F+    + 
Sbjct: 320 AVGAAQRVQVLLDTPVLPAPAVGS-LPNGSELRVEQLSHAYAPGNNVLDDVSFTLAPGTT 378

Query: 360 TAIVGASGSGKTTVTRLLMRFFDTTTGSVKVGGVDVREQSSEALMAQLSLVMQDVYLFDD 419
           TAIVG SG+GK+T+ RLL+RFFD   G + +GGVD+R+  S  L  ++  V+Q+V L   
Sbjct: 379 TAIVGPSGAGKSTLARLLLRFFDPDAGRITLGGVDLRQIESRELYRRIGFVLQEVRLIHA 438

Query: 420 SLEANIRVGSPDASARDVAEAARLAGVDEIVARLPQGWNTPVGEGGASLSGGERQRVSLA 479
           S+  NI +G P A+   V  AARLA +   + +LP+G+++ VGE  A LSGGE+QR+S+A
Sbjct: 439 SVADNIALGKPAATREQVEAAARLANIHTRILQLPRGYDSVVGE-DAQLSGGEQQRLSIA 497

Query: 480 RALLKRAPIVLLDEATAALDPHNEAFVQAAIQRLMQNSTVLVIAHRLPTIMAADQILVLD 539
           RA+L   P+++LDEATAA D  +EA +Q A+ R  +  T+LVIAHRL T+M ADQILVLD
Sbjct: 498 RAVLLDPPVLVLDEATAAADAESEAAIQDALSRFARGRTLLVIAHRLDTVMHADQILVLD 557

Query: 540 QGRLVESGTHAQLLSLNGRYAGFW 563
           QG L E G H++LL+  G YA  W
Sbjct: 558 QGALCEQGRHSELLNRQGLYARLW 581